Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value SEQ36884 219 3e-52 >SEQ36884 Length=2041 Score = 219 bits (242), Expect = 3e-52 Identities = 263/357 (74%), Gaps = 3/357 (1%) Strand=Plus/Plus Query 94414 ACCGCGGCCTCGATCTCCCCATCGGAGACGAACGCGCCCTGTATCCGGATGGCGCTGCGC 94473 ||| | |||| || |||| | |||| |||||| |||||||| | || | | || | Sbjct 358 ACCACCGCCTGGACCTCCTCGTCGGTGACGAAGGCGCCCTGGAGGCGCTTCGGCTTGTTC 417 Query 94474 GCCCCCACCGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCG 94533 |||||| ||| | ||| | ||||| ||||| || ||||||| |||||| ||||||| | Sbjct 418 GCCCCCTGCGGGATGAACAGGCCGTCGCCCATACCGATGAGCTTCTCGGCGCCGCCCTGG 477 Query 94534 TCCAGGATCACCCGGCTATCGGTGAGGGACGCTGTGGCGAACGACAGCCGCGAGGGCACG 94593 || ||||| || ||| || || || || | || ||||||| |||||| || |||||| Sbjct 478 TCGAGGATGACGCGGGAGTCCGTCAGCGAGGACGTCGCGAACGCCAGCCGGGACGGCACG 537 Query 94594 TTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 94653 ||| ||||||| || || || || || |||||||| || |||||||||||||| || || Sbjct 538 TTGGTCTTGATCAGACCGGTGACGACGTCCACGGACGGACGCTGCGTCGCCAGCACCAGG 597 Query 94654 TGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTC 94713 || || || || || || |||||||| | ||| ||||| ||| | |||| | ||| | Sbjct 598 TGGATACCCGCGGCGCGGGCCTTCTGGGTGATCCGGACGATGGCGTCCTCGATCTC---C 654 Query 94714 TTGTAGCCACCCATCATGAGGTCCGCGAGTTCATCCACCACTACCACGATGTAGGGG 94770 || | | |||||||||||| ||||| || || || || ||||||||| ||| Sbjct 655 TTCGGGGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGACGCACACGATGTACGGG 711 Score = 145 bits (160), Expect = 5e-30 Identities = 400/608 (66%), Gaps = 25/608 (4%) Strand=Plus/Plus Query 94788 GTGGCGCACGCCAGCCTCCTGCATCTGCCGGTATCGGTCGTCCATCTCTACGGTGAGCCA 94847 ||||||||||| || || ||| | | ||| || | |||||||| || ||||| Sbjct 789 GTGGCGCACGCGGGCGGACTTCATGTCCATGTACCGCTGCTCCATCTCCTCGACCAGCCA 848 Query 94848 CCGCAGCGTTTTCACCGCCTCGTCAGCCTCTGTAACCACGGGCTGGAGAAGGTGGGGGAT 94907 ||||| || |||||| | | || || | | ||| || ||||| ||||| Sbjct 849 GGTCAGCGCCGTCGCCGCCTTCTTCGGCTGCGTGATGATCGGCGTGATGAGGTGCGGGAT 908 Query 94908 ACCGTTGTACGGGGTGAGCTCGACACAT-TTGGGGTCGATCATGATGAGTTTGACCCGAT 94966 || | ||| ||||| ||||| || ||| || ||||||| | |||||| |||| | Sbjct 909 CCCCTCGTAGGGGGTCAGCTCCAC-CATCTTCGGGTCGACGAGGATGAGGCGGACCTCCT 967 Query 94967 CAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGCCCG 95026 | |||||||||||| ||| | || || |||| ||||||| |||| ||||| || | Sbjct 968 CCGGGGTCGCCCGGGTGAGGATGGACACGAGCAACGAGTTGACGAAGGCCGACTTACCGG 1027 Query 95027 ATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTGGCCAGGTTC---AGGGAGACGT 95083 | ||||| | ||| || |||||||| ||||||||||| | || || | | |||| Sbjct 1028 AGCCGGTGGAGCCGGCGACCAGCAGGTGCGGCATCTT---CTGGATCGAGTGCGCGACGA 1084 Query 95084 CCTTACCCTCGACGTCCTTGCCCACTGCCACGGTCAACGGATGGT---------CATCCT 95134 | ||||||| ||||||||||| | | | || ||| | || | || Sbjct 1085 AATCGCCCTCGATGTCCTTGCCCAGACCGATGAGCATCGGGTCGTGGTCGGCGACCACCG 1144 Query 95135 CGGGAACG------ATGT-GCTGCAACCGCACAGTCTGCCGTTCCGGCCGGGGGAGCTCG 95187 | ||| || | || |||| | |||||| ||| ||| |||| || | |||| Sbjct 1145 CCGGAGCGTGCAGCACGTCGCTG-AGCCGCACCATCTCCCGGTCCGTGTTCGGCACCTCG 1203 Query 95188 ATTCCTACGGCTGTTTTCCCGGGGATGGGGGCAACCACCCGCACGCTCTCCGTTGCGAGC 95247 || || || || | ||||| ||||| |||| | || || || | ||||| || | Sbjct 1204 ATGCCGACCGCGGACTTCCCCGGGATCGGGGTGAGCAGACGGACATTGTCCGTCGCCGCC 1263 Query 95248 GCGTAGGCCAACTGGGACTGCAGTTGTGCGACTTTCTGGATGCGCACACCCGGCCCCAGT 95307 || ||||||| | |||||||| | | || || || ||||||||| || || Sbjct 1264 GCATAGGCCAGGTTCGACTGCAGGTTGGTGATCTTGGAGACCTTCACACCCGGGCCGAGC 1323 Query 95308 GTGATCTCGTAGCGTGTGACGCTCGGTCCATCGGTGCGGCCGGTGACCTTGGCCTCGATG 95367 || |||||||| ||||| |||| || || | |||||||||| ||| || | Sbjct 1324 TCGACTTCGTAGCGGGTGACCGTCGGCCCCCGGGAGAAACCGGTGACCTGGGCGTCCACC 1383 Query 95368 TCGAACTC 95375 | |||||| Sbjct 1384 TTGAACTC 1391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339930484078640