Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_023741.1 Length=69641 Score E Sequences producing significant alignments: (Bits) Value seq2825 134 6e-27 >seq2825 Length=19190 Score = 134 bits (148), Expect = 6e-27 Identities = 400/603 (66%), Gaps = 38/603 (6%) Strand=Plus/Minus Query 44839 TCGTCCACCTCGCGGGTCTCGGCCCCGGTGTCGAGCGCGGTCAGGCTGACCAGCTTCATG 44898 ||||| | ||| ||||||||||| ||| || |||| ||||||| || | || ||| || Sbjct 6791 TCGTCGAACTCCTGGGTCTCGGCCTCGGCGTAGAGCTGGGTCAGGGTGGCGAGTTTCTTG 6732 Query 44899 GCGCGTGTGCTGCCCGCC-AGGTCGAGCACCAGGGCGTCGTCCTTGT------------- 44944 |||| | || |||| ||||||| ||||| |||||| ||||| Sbjct 6731 TCGCG-GAGCATCCCGGTGAGGTCGATGACCAGTGCGTCGGTCTTGTCCTGTCCGGTGTC 6673 Query 44945 ----TCGG-GTACAGCCGCAGCGCC-CGACCGACCATCTGGCTGTAGAGGTTGCGGCTG- 44997 |||| ||| || || | |||| || ||||| || || | | || | || ||| Sbjct 6672 CGGGTCGGTGTAGAGACGGA-CGCCACGTCCGACAATTTGCGCGAAAAG--TACGTCTGA 6616 Query 44998 -CGGGTCGGCCGCGCCAGCACCACGGTGTCGCACATGGGGAAGTCCGCGCCCTCGGTGAG 45056 | ||| || || |||||||| || ||| || |||||||||||||||||||||||| Sbjct 6615 CCTGGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGTCCGCGCCCTCGGTGAG 6556 Query 45057 CACCTGCACCGTGACCAGCGCGCGGGCGGCACCGCTGCGGAAACTCTC-GTAGATGGGCA 45115 ||||||||| ||||||| || ||| | ||||||||| |||| | |||||| | Sbjct 6555 CACCTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGG-AACTGGCGGTAGATTTCCT 6497 Query 45116 GCCGGTCGGCGTAGCTGATCGC-GCCGGTGACCGCGACGGCCGGATAGTCG-GCGTCTGT 45173 |||| || || | |||| | || ||||| |||| || || ||| || ||| | || Sbjct 6496 GCCGCTCCGCCTTGCTG-TGGCTGCCGGACACCGACCGGGTGGGGTAGCCGCGCG-CGGT 6439 Query 45174 CAGTGCGTCTGCGATGTGGTGGGCGGCGTCGACACTGGCCGCGAAGATGATCGGGCGGCG 45233 || || | || | | | | | ||||| | ||||||||||||||| ||| Sbjct 6438 GAGCTCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGAAGATGATCGGGACGCG 6379 Query 45234 GTCGGCGGCGTGCAGCTTGATCGCGTCCACGACGTACTGCGTGCAGGCTTCCATCACCTC 45293 |||||||||||| | | ||||| ||| | | | | |||| ||| ||||| Sbjct 6378 GTCGGCGGCGTGGCGGAGCACGGCGTCGACGGTGGTCGGGATCGAGGCACGCATGACCTC 6319 Query 45294 GGCCAGCTCGCCCTGGTGGAAGTCACCGGCCAC---GCTGCGCACGTCGTTGAGGGCATC 45350 | |||| ||| ||| | | |||| ||| | || || | | || |||| | Sbjct 6318 GTCCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCCGGGCGAGGAGG---TT 6262 Query 45351 CAGGCCCTTGATGCGCACCGTGAGGCCACGGGGCTGCACCAGGAAGCCCTTCTTGATGGC 45410 |||| || | || ||| || || || |||||| | || ||||| || || | ||| || Sbjct 6261 CAGGTGCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACCCGTTGTCGATCGC 6202 Query 45411 CCA 45413 ||| Sbjct 6201 CCA 6199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 222601248991810