Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_024145.1 Length=70667 Score E Sequences producing significant alignments: (Bits) Value seq2825 107 9e-19 >seq2825 Length=19190 Score = 107 bits (118), Expect = 9e-19 Identities = 257/384 (67%), Gaps = 6/384 (2%) Strand=Plus/Minus Query 42802 GGGGAAGTCAGCGCCCTCGGTGAGCACCTGGACGGTCACCAGGGCGCGGGTCTCACCCGA 42861 ||||||||| |||||||||||||||||||| || || |||| ||| ||| | || || Sbjct 6579 GGGGAAGTCCGCGCCCTCGGTGAGCACCTGCACAGTGACCATGGCCCGGATTTCGCCGCT 6520 Query 42862 GCGGAACCGGCTGTAGACCGGCTGACGCTCGGCGTAGGCCATCGC-GCCGGTCACGGCCT 42920 ||||||| ||| ||||| ||| ||||| || | || | || ||||| ||| | | Sbjct 6519 GCGGAACTGGCGGTAGATTTCCTGCCGCTCCGCCT-TGCTGTGGCTGCCGGACACCGACC 6461 Query 42921 CGGCGGTGTACCCGACCGCGCTCAGTGAGTCAGCGATGTGGTGGGCGGCGTCGACCGAGG 42980 || || ||| ||| |||| | || | | || | | | | | ||||| || Sbjct 6460 GGGTGGGGTAGCCGCGCGCGGTGAGCTCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACA 6401 Query 42981 CGGCGAAGATGATGGGCTGGCGGTCCTTGGCGTGCAGCTCGATGGCGTCGACCACGTAGC 43040 ||||||||||||| || |||||| |||||| | | ||||||||| || | Sbjct 6400 CGGCGAAGATGATCGGGACGCGGTCGGCGGCGTGGCGGAGCACGGCGTCGAC--GGTGGT 6343 Query 43041 TGG--TCGCGGCCTCCATCACCTCGGCCAGCTCGGCCTGATGGAAGTCACCGGCCACGTT 43098 || ||| ||| ||| |||||| |||| |||| ||| | | |||| ||| | || | Sbjct 6342 CGGGATCGAGGCACGCATGACCTCGTCCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGT 6283 Query 43099 CCGCACGTCATCGAGCTTGTCCAGGCCCTTGATCTTCACGGTGAGGCCGTGAGGCTTGAC 43158 | | |||| || |||| || | | |||||| || ||| | ||| ||| Sbjct 6282 CTTGATCCGGGCGAGGAGGTTCAGGTGCTCGGTGACCACGGTCAGCCCGCGGGGCGGGAC 6223 Query 43159 GAGGAACCCCATCTTGATGGCCCA 43182 ||||||||| | | ||| ||||| Sbjct 6222 GAGGAACCCGTTGTCGATCGCCCA 6199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225882604146340