Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value SEQ17778 127 4e-24 >SEQ17778 Length=11298 Score = 127 bits (140), Expect = 4e-24 Identities = 211/305 (69%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 183014 ATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTT 183073 ||||| || ||||| | | ||| | ||| || | | || || ||||||||| | | Sbjct 3956 ATGACGACCTTTGGAACTCGGCGCAATTGCAGCTGGTCAATGAGGGCAAAATGCATGGAT 4015 Query 183074 TTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTT 183133 || | ||||||| ||||| || |||||||||||||||||| ||| || || | || Sbjct 4016 TTCTGAGAATGTATTGGGCCAAGAAGATACTTGAATGGACAGAAACACCAGAGCAGGCGC 4075 Query 183134 TGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGAT 183193 || ||||| || | ||||| | || ||| || || || ||||| ||||| | Sbjct 4076 TGGAGTATAGCATATTGCTGAACGACAAATACAGTCTGGATGGCCGCGATCCCAACGGTT 4135 Query 183194 ACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTA 183253 | || || || ||||||||| | | || | || |||| || ||||| || | ||| Sbjct 4136 ATGTGGGCTGCATGTGGTCTGTCGGGGGTATCCATGATAACGCATGGAAGGAGCGTGCTA 4195 Query 183254 TATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTA 183313 |||| || ||||| | |||||||| ||| || | | ||| |||||||||||| | Sbjct 4196 TATTCGGCAAGATTCGCTATATGAACTATCAGGGATGTAAACGAAAATTTGATGTTAATG 4255 Query 183314 CATTT 183318 ||||| Sbjct 4256 CATTT 4260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902890552832800