Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 125 5e-24 seq4983 105 4e-18 >SEQ10860 Length=7223 Score = 125 bits (138), Expect = 5e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | || | |||||| || | || ||||||||| || |||||||||| Sbjct 1452 CACCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGG 1511 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || ||||| | || |||||||| || |||||||| ||||||||||| |||||| | | Sbjct 1512 AAAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAG 1571 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||||||||| ||| || | || |||| || | ||| || | ||| Sbjct 1572 GAATTCCTTCTTTGTCCTGAATCTT-GGCTTTGACATTTTCAATGGTATCCGACGGTTCG 1630 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || |||| ||||| || ||||| || | ||||| || ||||| ||||| || Sbjct 1631 ACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCATCGT 1683 >seq4983 Length=3163 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||||| || || || ||| || || |||||||| |||||| Sbjct 644 CCACCACGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAG 703 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || ||||| || |||||||| || |||||||||||||||||| | || Sbjct 704 AGGGTACGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 763 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| || || | | || | || | ||| || | || || Sbjct 764 ATACCCTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAAC 822 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 || | || || || || || || || || |||||||||||||||||| || Sbjct 823 CTCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCATATTT 874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328519299681600