Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
SEQ10860 125 5e-24
seq4983 105 4e-18
>SEQ10860
Length=7223
Score = 125 bits (138), Expect = 5e-24
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | | || | |||||| || | || ||||||||| || ||||||||||
Sbjct 1452 CACCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGG 1511
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| | || |||||||| || |||||||| ||||||||||| |||||| | |
Sbjct 1512 AAAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAG 1571
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||||||||| ||| || | || |||| || | ||| || | |||
Sbjct 1572 GAATTCCTTCTTTGTCCTGAATCTT-GGCTTTGACATTTTCAATGGTATCCGACGGTTCG 1630
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|| |||| ||||| || ||||| || | ||||| || ||||| ||||| ||
Sbjct 1631 ACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCATCGT 1683
>seq4983
Length=3163
Score = 105 bits (116), Expect = 4e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | |||||| || || || ||| || || |||||||| ||||||
Sbjct 644 CCACCACGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAG 703
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || | || ||||| || |||||||| || |||||||||||||||||| | ||
Sbjct 704 AGGGTACGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 763
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| || ||||| || || | | || | || | ||| || | || ||
Sbjct 764 ATACCCTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAAC 822
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753
|| | || || || || || || || || |||||||||||||||||| ||
Sbjct 823 CTCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCATATTT 874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328519299681600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |