Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value SEQ36764 107 2e-18 >SEQ36764 Length=622 Score = 107 bits (118), Expect = 2e-18 Identities = 180/254 (71%), Gaps = 11/254 (4%) Strand=Plus/Minus Query 142559 ACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACA 142618 || ||||| ||||||||| | | || ||||| | ||||| || || ||||| ||| Sbjct 512 ACCTCGTCTCCGCGTGGATCGTCTCCGAGCTCGACAATATGGCGCTGCCCCCGTGCCACC 453 Query 142619 TGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTT 142678 || ||||||| || |||||| | || | || ||||| |||||||| || ||||| Sbjct 452 TGCTGTTCCAGCTCTACGTCGCC--GACGGGACG-CTGTCCTGCCAGCTCTACCAGCGCA 396 Query 142679 CGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACAGC 142738 || ||| |||||||||||| ||||||||||| || || |||||||| | || || Sbjct 395 GCGCGGACATGTTCCTCGGCGTGCCGTTCAACATCGCCTCCTACGCGCTGCGGACCCA-- 338 Query 142739 TCATTGCTCGC---GAATGC-GGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCAAT 142794 || || |||| | | || || ||||| |||| || | ||| ||| |||| | Sbjct 337 -CA-TGTTCGCCCAGCAGGCGGGCCTGGAGGTCGGCGAGTGCGTGTGGACCGGCGGCGAC 280 Query 142795 TCGCACATCTACGA 142808 | ||||||||||| Sbjct 279 TGCCACATCTACGA 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500210756054800