Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq61 306 4e-78
seq4005 118 1e-21
SEQ10860 98.7 9e-16
seq2872 95.1 1e-14
>seq61
Length=55249
Score = 306 bits (338), Expect = 4e-78
Identities = 1196/1853 (65%), Gaps = 72/1853 (4%)
Strand=Plus/Minus
Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631
|| || || |||||||||| ||||||||| || || |||||||| |||||||
Sbjct 27981 GCAGCTGGCTTTGTGCGCAGATAATACATTCCTGTCTTGAGGCCTGCCTTCCACGAGAAG 27922
Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691
||||| || || | || |||| | || || || ||| || || || |||||
Sbjct 27921 AAATGAATGGATGTTAACTTGCCGTAGTTGGGTTCGGCAACGTGAATGTTGAATGATTGA 27862
Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTTCA-- 146749
|| || || || ||||| ||| || || ||||||| | ||| ||| |||||
Sbjct 27861 CTCTGGTCAATAAAAGCACCGCGATCAGCTGCCATCT---TGATGG---TTGACTTCACC 27808
Query 146750 ----TTTCCCAAGCGGTTTTGTACAGC-CCCTTAACGCTATCTG--GAATACCTTCAATG 146802
||||||| |||||||||| || ||| || || ||| |||| ||| |||
Sbjct 27807 GAGATTTCCCAGACGGTTTTGTAAAGATCCCGTA---CTTCCTGAGGAATGGATTCGATG 27751
Query 146803 TTTTGAATAGAGCC-CTTGTGCGCAAAAATAGTGTTTCGT-ATTTCGGG--CGTGTAAAG 146858
||||| || ||||| | || |||| || || ||| | || || | ||||
Sbjct 27750 TTTTGTATGGAGCCACGACTG-GCAATGATT-TGATTCTTCATGTCATCATCCCATAAA- 27694
Query 146859 GTTTAGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAG 146918
| ||||| | | || | |||| ||||| ||||| | ||||| || | ||
Sbjct 27693 -TCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTGAACTCTCCGGACAA 27635
Query 146919 CACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATAT 146978
|| || ||| || | || ||| | |||||||| ||||||||||| || | ||
Sbjct 27634 AACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCCATGAT 27575
Query 146979 TTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGC 147038
||||| || | ||| || ||||| || || | || || |||| | || | | |
Sbjct 27574 CTGGGCAGTAGATGCCGTGGGCATTGGAGCTACAAGCAGCGAGTTTCTAACGCCATGCTC 27515
Query 147039 ACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACAT 147098
||| || || | || ||| ||||| | | ||| ||| || ||||||
Sbjct 27514 TTTGATTTTCAATTTTAGAGCAGTCCAATCCCAAAGGCTTGTGGGTGTCTTGTCCCACAT 27455
Query 147099 GTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTC 147158
|||||||| || | ||| || | |||| |||||| | || ||| |||||
Sbjct 27454 ATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGGACCGTC 27395
Query 147159 GCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTG 147218
|| |||| ||||| || ||||| || || |||||||| ||||||||| ||| ||
Sbjct 27394 CTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAAGATCTG 27335
Query 147219 TTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATC 147278
| || || | |||| || ||||| || || | ||||| || | ||||| ||
Sbjct 27334 CTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTAAGGCGTC 27275
Query 147279 GGCCAAACCCTGGATACCGACGCCGATAGGTCGATG-CTT---TTCG-TTGCTGCGCTTC 147333
||| || ||||| | || | ||| || || ||||| ||| || | || || || ||
Sbjct 27274 GGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTTTGCCTC 27215
Query 147334 GCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACT 147393
| || || ||||||| ||| |||||| || ||||| | || | ||| |
Sbjct 27214 GGGCA-GC----GGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGTT 27160
Query 147394 TTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTC-GACACGTACGCATTG 147452
||||| | | || ||||||| |||||| | || ||| | ||| || |||
Sbjct 27159 TTAGTAACTTCCTTCAGTTTCTTGAAATCGAATGTTTTCTCTGAAGTCACAAACATATT- 27101
Query 147453 GTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGC 147510
|| ||| || || |||| |||||||||||| |||| |||| || || | || |
Sbjct 27100 ---CAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGG-GT-GCCGAATATTCA 27046
Query 147511 ACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTC 147570
|| ||||| | ||| |||||||||||||| ||| || | ||| ||||||||||| |||
Sbjct 27045 ACAATTTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTC 26986
Query 147571 CGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACG 147630
| ||||| | ||| ||||||||||||||||| ||| ||||| ||||| | ||||||
Sbjct 26985 CTGTTGCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACA 26926
Query 147631 AT---AAACCTATGCAG---GTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTT 147684
|| | ||| | | || || || || ||| ||| ||| |||||| |
Sbjct 26925 ATGGCATACCAAAG-AGTTTGTGCTTTAATCACACGATTTGC-----GCGACCCTCGCTC 26872
Query 147685 TCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACAC 147744
|||||| |||| | |||||| || || || | || | | ||||||||||
Sbjct 26871 TCGTACTTTGTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACAC 26812
Query 147745 TGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCC 147804
| || ||||||| ||||||||| || | || | || || ||||||||||||
Sbjct 26811 TTGTGAGGACACAACAGCGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCG 26752
Query 147805 GGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGT 147864
|| | ||||| ||||| | ||||| || ||| || || || |||| |||| |
Sbjct 26751 GGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTT 26692
Query 147865 TTCAAAT-TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGC 147923
|| | | ||| || | | |||| |||| ||||| ||||| | ||| | ||| | ||
Sbjct 26691 TTGAGGTCCAAGAACTC-AAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGC 26633
Query 147924 ACCTTTACGCTTTCCG---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCAC 147980
||| ||||| ||| || || ||||||| || ||| || |||||||| | |
Sbjct 26632 GCCTGGTCGCTTGCCGCCACCTTGATCGACATAACGAGCCACATTATTAAACACTCTGAG 26573
Query 147981 CATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCG 148040
|||||| ||| || | | |||||| || ||| | |||| | |||| ||| ||
Sbjct 26572 CATGGGCACCAAACCATTTGAAGTGCCATTAGTGCCACAGATCGAGGTGCCCTTGGCACG 26513
Query 148041 CACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC 148100
| ||||| || | |||||||| || || | || || || || || | |
Sbjct 26512 AATACAATGCACATTGAGCCCAATGCCACCAGCGGATTTGGAGATCATTGCACACTGCTC 26453
Query 148101 CAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCA-----AGCAAAAAACAC 148155
| | | || | ||||| |||||| ||| || ||| | | ||||||
Sbjct 26452 GACGGACTTGAAAATGCCTTCGATGGAATCG-----GAAACCATTGTTAAAAGGAAACAC 26398
Query 148156 GAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAAC 148215
|| |||| || ||| || | || | || | || || || ||||||||
Sbjct 26397 GATGACATCTGGGGACGATTGGTGGCAGCAGCAAATAACGTTGGCGATGCATGCGTAAAA 26338
Query 148216 AATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATG 148275
| || | || || ||||| | |||| |||||||| ||||| || ||
Sbjct 26337 TAGCGTTCCGATAACAGATTGTAAGTCTCGACAGCGGAATCGATGTCTTCGCCATGGATT 26278
Query 148276 CCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTG 148335
|| | ||| || | ||| ||||||||||| || |||||||| | || ||||||||
Sbjct 26277 CCAATCGCCACTCTCATCAGCATGTGCTGCGGACGTTCGGCGATTTTGCCATTGATCTTT 26218
Query 148336 AGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATC 148388
|| | ||| | |||||||| ||| | ||||| || ||||| |||||||
Sbjct 26217 AGCAAATACGAACGCTCGAGGGTCTTGAAGCCAAAATAGTTGTAGCCAAAATC 26165
>seq4005
Length=24450
Score = 118 bits (130), Expect = 1e-21
Identities = 233/339 (69%), Gaps = 7/339 (2%)
Strand=Plus/Minus
Query 51541 CAATACCGATGATGCCGCAGCCGAGACGTCCGCCCGAGTTGCCCGTGGTCTTGCTCAGCG 51600
||||||| || | ||||| || | ||| |||| | ||||| || |||||||||| |
Sbjct 15555 CAATACCAATCACACCGCAACCAATGCGTGCGCCAGCATTGCCAGTTGTCTTGCTCAACT 15496
Query 51601 GATGGTCGGTGAGGCCGAGATCGTCGCGCTTTGCGTGAACCACCAGACTGCGGCCAACGA 51660
||| | ||| ||||| ||| | || || ||||| | | |||| |||| ||
Sbjct 15495 CGTGGCCACCCTTGCCAAGATCATCGGCATCCGCATGGACCACAACAGTGCGTCCAATGA 15436
Query 51661 CGCTATTTTCGCCGAAAAGCGTCATCACGTTGTCGATCTTGTCCACTTCGGTGAGGGCGT 51720
||| || ||||| || || || ||| | ||||| | | || || | ||| | |||
Sbjct 15435 TGCTGTTCTCGCCAAAGAGAGTTATCTGGCTGTCGGTGATATCGACCGCAGTGGGACCGT 15376
Query 51721 TGGACACTTTAGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGT-TCGGA 51779
| | | ||| || |||||||| ||||| | ||||||| || ||| | | ||
Sbjct 15375 CGC---CGCTGGCCGTGATGTTGCCCAAATCGCCCAAGTGGCGC-TCACCGTCTGTGGGT 15320
Query 51780 GCGCCGTGGTCGCTGCCGGTG-GGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCT 51838
|| ||||| || || | ||| |||||||| || || | ||| |||| |||||| |
Sbjct 15319 GCACCGTGCTC-CTTCTTGTGCGGGTTGAAATGGGGTCCTGATGACATGCATCCGTTGGT 15261
Query 51839 GGTGTCGCCGAATTCGTGCACGTGGAATCCGTGCAGGCC 51877
| ||||||| || || |||||||||||||| ||||| ||
Sbjct 15260 GTTGTCGCCAAACTCATGCACGTGGAATCCATGCAGACC 15222
>SEQ10860
Length=7223
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||||||||| || ||||| ||| | || ||| |||||| | || || |||| |
Sbjct 1487 GACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCA 1546
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | |||||||||||||||||| || |||||||| || ||| || ||| |
Sbjct 1547 AAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 1606
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | ||| || || || | || | || ||||| || || |||||
Sbjct 1607 TTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTA 1666
Query 132110 ATGAAAATCTGCAT 132123
| ||| || |||||
Sbjct 1667 ACGAAGATTTGCAT 1680
>seq2872
Length=9359
Score = 95.1 bits (104), Expect = 1e-14
Identities = 249/368 (68%), Gaps = 13/368 (4%)
Strand=Plus/Minus
Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973
||||| || || || ||| ||||| |||||||| ||||| ||||| || || |||
Sbjct 3345 ATGCCTGGACTTACATTCTCCAACGAATTGATCTCTCGCGATGAAGGTCTGCATTGTGAC 3286
Query 46974 TTTGCG-TGTCTCTATTACAAGACGCGCGTGAATGAGAAATTAAACTCGGACACG-ATCC 47031
|||||| || | | || ||| | | ||| | | | | | |||| ||| |||
Sbjct 3285 TTTGCGGTGCTTATGTTCCAACATTTG-GTGCA-GCGGCCT---AGTCGGGAACGCATCA 3231
Query 47032 TGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCG 47091
| || | | ||| || |||| || || ||||||| | || | ||||||||||
Sbjct 3230 TTGAAATCATAACGGATGCTGTGACTATTGAGCAGGAGTTCCTCACCGATGCGCTGCCCG 3171
Query 47092 TCGCCTTGCTGGGCATGAAC-GCACAGTCT-ATGTGCGAATATATTGAGTTTGTGGCGGA 47149
|| |||| | ||||||||| | | ||| |||| ||||||||| |||||||| || ||
Sbjct 3170 TCAACTTGATTGGCATGAACTGTGC--TCTGATGTCCGAATATATCGAGTTTGTCGCTGA 3113
Query 47150 TCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTT-TAATGCTCGTAATCCGTTTGAGT 47208
||| || ||||| |||| ||| | || |||| || | ||||| || ||
Sbjct 3112 TCGCCTATTGGTTGAGCTTGGA-GTGGGCAAGATTTACAACACAAAGAATCCATTCTCGT 3054
Query 47209 TTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGT 47268
| ||| | | || || | || ||||||||||| || |||||||| ||| || || |
Sbjct 3053 TCATGGAGATGATCTCTTTGGATGGCAAAACCAACTTCTTCGAGAAGAAAGTGGGTGAAT 2994
Query 47269 ATAAGCGC 47276
|| |||||
Sbjct 2993 ATCAGCGC 2986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476336523007800
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