Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq3808 138 1e-27
SEQ36764 120 4e-22
>seq3808
Length=15542
Score = 138 bits (152), Expect = 1e-27
Identities = 317/476 (67%), Gaps = 6/476 (1%)
Strand=Plus/Minus
Query 146860 ACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTC 146919
||| ||| | ||| || ||||| || || || || || | || || || || |
Sbjct 5990 ACCTGCCGCTTAATGTTAAGCTTAGGAAATGGACGAGGCTGCCGCTTTAGTTGCTGTTGC 5931
Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979
| || ||||| || || || || || || | || |||| |||||| |||||||| ||
Sbjct 5930 AATGGTTCCACATGATTAAGATACACATGAGAATCTCCCATGGTGTGGACAAAGTCACCA 5871
Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039
||||| | |||||||| ||||| | ||||||||||||||||| || ||| |||||
Sbjct 5870 GGCTTCAATCCGGTCACATGGGCAATCATGTAGGTGAGCAGCGCATAAGAGGCGATGTTA 5811
Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAG--CTCCC 147097
|| || ||||| || |||||||| | | ||||||||| || || ||||| ||||
Sbjct 5810 AAAGGAACCCCGAGCCCCATGTCTGCACTTCGCTGGTACAGATGACAGGAGAGTTCTCCT 5751
Query 147098 CG----TCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGC 147153
|| | | ||| || ||||| || | |||||| || ||||| ||||| |||
Sbjct 5750 CGAGATTGCGACACATAGAACTGCACCAAGCAGTGGCAAGGAGGCAGTGCCATTTTGGGT 5691
Query 147154 AGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATC 147213
| ||| ||| ||||| ||||| | | | || | | ||| || | ||||
Sbjct 5690 ATATCCAAGGGATTCCACGCCGACATAATGATACGACGATCCGAGGGATTGTTTCGAATC 5631
Query 147214 TCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCC 147273
|| || || | |||||| || | ||| || || | ||||| |||||
Sbjct 5630 GTATCAATCACTTGCTGCAGCTGATCGATGCCTTGTCCGCTGTAGTCATCATCGCAGGTG 5571
Query 147274 ACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329
||| ||| ||||| || | |||||| |||||||| || || ||||| || ||
Sbjct 5570 CGATACTCGGCTCCAAAATGACGCCACTGAAAGCCGTAGACCGGACCCAGATCCCC 5515
>SEQ36764
Length=622
Score = 120 bits (132), Expect = 4e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057
||||| | ||||| ||| |||||| |||| ||| |||||||| || || || ||| |
Sbjct 326 TGGGCGAACATGTGGGTCCGCAGCGCGTAGGAGGCGATGTTGAACGGCACGCCGAGGAAC 385
Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117
|||||| | | |||||| |||||||| || ||| ||||||||| ||||| | ||||
Sbjct 386 ATGTCCGCGCTGCGCTGGTAGAGCTGGCAGGACAGCGTCCCGTCGGCGACGTAGAGCTGG 445
Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCAT 147146
|||| | ||||||||| |||||||||||
Sbjct 446 AACAGCAGGTGGCACGGGGGCAGCGCCAT 474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583151728572000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |