Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
SEQ45565 116 5e-20
seq5601 98.7 1e-14
seq61 86.0 9e-11
>SEQ45565
Length=619
Score = 116 bits (128), Expect = 5e-20
Identities = 97/116 (84%), Gaps = 2/116 (2%)
Strand=Plus/Minus
Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809
|| || ||| ||| ||||||||| ||||||||||||||||||| |||||| | |||||
Sbjct 139 GCCGATCTGATCAGCTGGGGCGCCATCGGTGCGCGCACCACCGAAAGCCAGATCCACCGT 80
Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATT-GGCTTCAAAAACAGCACCGACGGCA 165864
|| ||||| |||||||| | |||||| | |||||||||||| ||||||||||||
Sbjct 79 GAAATGGCCTCGGCGCTCTC-CTGCCCGGTCGGCTTCAAAAACGGCACCGACGGCA 25
>seq5601
Length=8218
Score = 98.7 bits (108), Expect = 1e-14
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 1818069 ATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCACG 1818128
||| | |||||||| || ||||||| |||||||| | | | || | ||||||
Sbjct 208 ATGTTGAAGGGCGTAACCAGCTCGGGGAAGGTGAGATTTTGTGCTATGGAACGCGGCACG 267
Query 1818129 CCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTG 1818188
||||||| || || | | ||| ||||| ||||||| | || |||| |||| |
Sbjct 268 CCCACCTGATCGATACGCAAATTGGGATCGGGTGTGATGACAGTACGTGCGGAGAAGTCG 327
Query 1818189 ACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCCACG 1818248
|| || |||||||| |||| || || || | |||||||||||||||| ||| || |
Sbjct 328 ACACGTTTGCCCATCAAATTACCACGAATGCGACCCTCCTTGCCCTTGAGACGCGCCTTG 387
Query 1818249 AGGCCCTTGGTGGGCTTGCCCGAC 1818272
| ||||| ||| |||||||||
Sbjct 388 ATCGCCTTGAGGGGTTTGCCCGAC 411
>seq61
Length=55249
Score = 86.0 bits (94), Expect = 9e-11
Identities = 115/159 (72%), Gaps = 6/159 (4%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|| ||||||||||| ||||| |||||| ||||||||||| ||||| |||| ||
Sbjct 26612 GGTGGCGGCAAGCGACCAGGCGCTTTTGCCATTTACCTGGAACCTTGGCATTCCGATATC 26671
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
| | | ||||||||||||||||| ||||||| | ||| || | || ||
Sbjct 26672 TTTGAGTTCTTGGACCTCAAAAAGAACACGGGCAAGGAA----GAGCAC--AGAGCTCGT 26725
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATG 261946
|||||||| |||| | |||||| ||| |||||||||
Sbjct 26726 GATCTCTTCTACGCCTTGTGGATACCCGATCTGTTTATG 26764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7173364288009010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |