Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value SEQ17778 102 7e-17 seq4710 86.0 6e-12 >SEQ17778 Length=11298 Score = 102 bits (112), Expect = 7e-17 Identities = 180/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 44163 GAAGGTAAAATGCACCAATACATGCGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCG 44222 || || |||||||| || || | ||||||||| |||||||||| | || ||| | Sbjct 3997 GAGGGCAAAATGCATGGATTTCTGAGAATGTATTGGGCCAAGAAGATACTTGAATGGACA 4056 Query 44223 GAAGATGCGCAAACC--GCGCTCGTTCATGCCATCTATCTGAACGACAAGTACAGTTTGG 44280 ||| | | || | | ||||| | || ||| | ||||||||||| |||||| ||| Sbjct 4057 GAA-ACAC-CAGAGCAGGCGCTGGAGTATAGCATATTGCTGAACGACAAATACAGTCTGG 4114 Query 44281 ACGGTCGCGACCCCAACGGGTACGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGACA 44340 | || ||||| |||||||| || || || || |||||||| | | ||| |||| || | Sbjct 4115 ATGGCCGCGATCCCAACGGTTATGTGGGCTGCATGTGGTCTGTCGGGGGTATCCATGATA 4174 Query 44341 GGGCGTGGCGAGAGCTACCCATCTACGGCAAAGTGCGCTACATGAACTACAACGGTTGCG 44400 || ||| |||| | || | |||||| | ||||| |||||||| | || || Sbjct 4175 ACGCATGGAAGGAGCGTGCTATATTCGGCAAGATTCGCTATATGAACTATCAGGGATGTA 4234 Query 44401 TCAGAAAGTTTGATGTAAA 44419 |||| |||||||| || Sbjct 4235 AACGAAAATTTGATGTTAA 4253 >seq4710 Length=78879 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACT-CTCCTTTTGAATGTTGTAATCGGC 35568 |||||||| | | || |||||| || || | | |||||| || |||||||| || | Sbjct 8603 CCACCACGCAGACGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGA 8662 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 || || || | || ||||||||||| || || || || | |||||||| || | || Sbjct 8663 CAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGG 8722 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | |||||||| |||||| ||||| | | | | || || | ||||| Sbjct 8723 GATTCCTTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTCCAC 8782 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 ||||| ||||| || || || |||| || ||||| || || |||||| || Sbjct 8783 CTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCATTTTG 8834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450533802013400