Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_026584.1
Length=109871
Score E
Sequences producing significant alignments: (Bits) Value
SEQ36884 223 2e-53
>SEQ36884
Length=2041
Score = 223 bits (246), Expect = 2e-53
Identities = 265/357 (74%), Gaps = 3/357 (1%)
Strand=Plus/Plus
Query 97485 ACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCGC 97544
||| |||||| | ||| |||||| ||||| |||||||| | || | | |
Sbjct 358 ACCACCGCCTGGACCTCCTCGTCGGTGACGAAGGCGCCCTGGAGGCGCTTCGGCTTGTTC 417
Query 97545 GCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCG 97604
|||||| || | ||| | ||||| ||||| || ||||||| |||||| ||||||| |
Sbjct 418 GCCCCCTGCGGGATGAACAGGCCGTCGCCCATACCGATGAGCTTCTCGGCGCCGCCCTGG 477
Query 97605 TCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACG 97664
|| ||||| || ||| || || || || | || ||||||| |||| |||||||||
Sbjct 478 TCGAGGATGACGCGGGAGTCCGTCAGCGAGGACGTCGCGAACGCCAGCCGGGACGGCACG 537
Query 97665 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 97724
|||| ||||| || || ||||| || |||||||| || |||||||||||||| || ||
Sbjct 538 TTGGTCTTGATCAGACCGGTGACGACGTCCACGGACGGACGCTGCGTCGCCAGCACCAGG 597
Query 97725 TGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 97784
|| ||||| || ||||| |||||||||| ||| ||||| ||| | |||||| || | |
Sbjct 598 TGGATACCCGCGGCGCGGGCCTTCTGGGTGATCCGGACGATGGCGTCCTCGA--TC-TCC 654
Query 97785 TTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97841
|| | || |||||||||||| ||||| |||||||| || ||||||||| |||
Sbjct 655 TTCGGGGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGACGCACACGATGTACGGG 711
Score = 156 bits (172), Expect = 3e-33
Identities = 200/276 (72%), Gaps = 0/276 (0%)
Strand=Plus/Plus
Query 97859 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCCACGGTGAGCCA 97918
||||||||||| ||| || ||| | | |||||| | ||||||||| || |||||
Sbjct 789 GTGGCGCACGCGGGCGGACTTCATGTCCATGTACCGCTGCTCCATCTCCTCGACCAGCCA 848
Query 97919 CCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGAT 97978
||||| | | |||||| | |||| |||| | |||| | ||||| |||||
Sbjct 849 GGTCAGCGCCGTCGCCGCCTTCTTCGGCTGCGTGATGATCGGCGTGATGAGGTGCGGGAT 908
Query 97979 ACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCGATC 98038
|| | ||| ||||| || ||||||||||||||||||| | |||||| |||| ||
Sbjct 909 CCCCTCGTAGGGGGTCAGCTCCACCATCTTCGGGTCGACGAGGATGAGGCGGACCTCCTC 968
Query 98039 AGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGA 98098
|| | || ||| ||| ||||| || |||| |||||||| |||| ||||| || ||
Sbjct 969 CGGGGTCGCCCGGGTGAGGATGGACACGAGCAACGAGTTGACGAAGGCCGACTTACCGGA 1028
Query 98099 TCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTT 98134
||||||| ||| || ||||||||||| ||||| ||
Sbjct 1029 GCCGGTGGAGCCGGCGACCAGCAGGTGCGGCATCTT 1064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351264911629960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |