Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_026590.1 Length=90460 Score E Sequences producing significant alignments: (Bits) Value seq1762 140 2e-28 >seq1762 Length=3526 Score = 140 bits (154), Expect = 2e-28 Identities = 377/575 (66%), Gaps = 4/575 (1%) Strand=Plus/Plus Query 10198 CACGTCTGCCGCTGACGCTGCTTCAGCTATGACTGAGCTTGCCAAGGCTGGCTTCTCGGT 10257 ||| || ||| | ||||| || | || ||| | ||||| |||||| |||||||| || Sbjct 1248 CACCTCCGCCTCCGACGCCGCAGCTGCCATGGCCGAGCTGTCCAAGGGCGGCTTCTCCGT 1307 Query 10258 TGATGATTCGATTTCTGCGGCGAAGGGCACTTTGCAGTTGGCAGCTGCCGCGCAGATCGA 10317 || || ||||| ||||| ||||| || ||||| | || || || || |||||||| Sbjct 1308 CGACGAGTCGATGGGAGCGGCCAAGGGAACGCTGCAGCTCGCCGCCGCAGCACAGATCGA 1367 Query 10318 TGCTGCATCCGCTGCCGAGATTCAGGCAAACGCCATTTTGGCGTTCGGCTTGAACGCTGA 10377 || || ||| ||| ||||||| | | || | ||| ||| | || | |||| Sbjct 1368 GGCGGCTGACGCGGCCACGATTCAGTCGCAGGCGCTGCAGGCTTTCTCCCTGCAGGCTGG 1427 Query 10378 TTATGCGGGTAAAGCTGCGGATGTTTTGTCGAACGCGGCGAATGCTTCCTCGGCTGAGAT 10437 | | |||| | | || || | | |||||||| || || || || ||||| Sbjct 1428 TGACGCGGCCCGGGTGTCCGACATTCTCGCAGGTGCGGCGAACGCCTCATCCGCCGAGAT 1487 Query 10438 TACGGATGTTGCTGCCGCGTTGCAACAGGGCGGCGCTGTTTCTCGTGCTTTCGGGGTGTC 10497 || | || | |||| |||| ||| | || | ||||| | Sbjct 1488 CGAGGGCATCGCCCAGGGCCTGCAGCAGGCCGGAACCGTGGCGAACCAGTTCGGCATCAG 1547 Query 10498 GATGGAGGACACTTCCGCCGCGATTGGCCTACTCGCCAACAACGGCATTAAAGGCTCTGA 10557 || |||||||||||| | || | | | |||||||| ||||| | |||||||| Sbjct 1548 CATCGAGGACACTTCCACGGCCCTCGCAATGTTCGCCAACGCGGGCATCCAGGGCTCTGA 1607 Query 10558 CGCGGGCACCCTGCTCAAGTCTGCATTGTTGGCGTTGACGGACCAGTCGAATCCTGCGCA 10617 ||||||||| ||||||||||| ||| || ||||| ||||||||||| || || ||||| Sbjct 1608 CGCGGGCACGCTGCTCAAGTCCGCACTGCTGGCGCTGACGGACCAGGGCAAGCCCGCGCA 1667 Query 10618 GGGCGCTATTGA--AACCTTGGGTTTGACGGTTTATGACGCTCAGGGTCAGTTTGTTGGG 10675 || || || || ||| | || || |||| || ||| ||||| | || ||||| Sbjct 1668 GGCGGCGATGGAGGAAC--TCGGCCTGTCGGTGTACGACATGCAGGGCAACTTCGTTGGA 1725 Query 10676 CTTCAGTCCCTGTTTGGGCAGTTGCAGCAGGCGTCGAAATCGTTGACGCCTGAAATGTAT 10735 || | | | || || | ||| ||||| | ||| ||| ||||||| || |||| Sbjct 1726 CTACCGGCACTCTTCGACCAGCTGCAGGATGCGCAGAAGCGCATGACGCCGGAGGCGTAT 1785 Query 10736 CAGGCTGCGACTACGACCCTGTTCGGGTCTGATGC 10770 ||||| || || | || ||||| ||||| || Sbjct 1786 CAGGCGGCCACCGCCGTGCTCTTCGGCTCTGACGC 1820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 289184614452005