Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_026590.1
Length=90460
Score E
Sequences producing significant alignments: (Bits) Value
seq1762 140 2e-28
>seq1762
Length=3526
Score = 140 bits (154), Expect = 2e-28
Identities = 377/575 (66%), Gaps = 4/575 (1%)
Strand=Plus/Plus
Query 10198 CACGTCTGCCGCTGACGCTGCTTCAGCTATGACTGAGCTTGCCAAGGCTGGCTTCTCGGT 10257
||| || ||| | ||||| || | || ||| | ||||| |||||| |||||||| ||
Sbjct 1248 CACCTCCGCCTCCGACGCCGCAGCTGCCATGGCCGAGCTGTCCAAGGGCGGCTTCTCCGT 1307
Query 10258 TGATGATTCGATTTCTGCGGCGAAGGGCACTTTGCAGTTGGCAGCTGCCGCGCAGATCGA 10317
|| || ||||| ||||| ||||| || ||||| | || || || || ||||||||
Sbjct 1308 CGACGAGTCGATGGGAGCGGCCAAGGGAACGCTGCAGCTCGCCGCCGCAGCACAGATCGA 1367
Query 10318 TGCTGCATCCGCTGCCGAGATTCAGGCAAACGCCATTTTGGCGTTCGGCTTGAACGCTGA 10377
|| || ||| ||| ||||||| | | || | ||| ||| | || | ||||
Sbjct 1368 GGCGGCTGACGCGGCCACGATTCAGTCGCAGGCGCTGCAGGCTTTCTCCCTGCAGGCTGG 1427
Query 10378 TTATGCGGGTAAAGCTGCGGATGTTTTGTCGAACGCGGCGAATGCTTCCTCGGCTGAGAT 10437
| | |||| | | || || | | |||||||| || || || || |||||
Sbjct 1428 TGACGCGGCCCGGGTGTCCGACATTCTCGCAGGTGCGGCGAACGCCTCATCCGCCGAGAT 1487
Query 10438 TACGGATGTTGCTGCCGCGTTGCAACAGGGCGGCGCTGTTTCTCGTGCTTTCGGGGTGTC 10497
|| | || | |||| |||| ||| | || | ||||| |
Sbjct 1488 CGAGGGCATCGCCCAGGGCCTGCAGCAGGCCGGAACCGTGGCGAACCAGTTCGGCATCAG 1547
Query 10498 GATGGAGGACACTTCCGCCGCGATTGGCCTACTCGCCAACAACGGCATTAAAGGCTCTGA 10557
|| |||||||||||| | || | | | |||||||| ||||| | ||||||||
Sbjct 1548 CATCGAGGACACTTCCACGGCCCTCGCAATGTTCGCCAACGCGGGCATCCAGGGCTCTGA 1607
Query 10558 CGCGGGCACCCTGCTCAAGTCTGCATTGTTGGCGTTGACGGACCAGTCGAATCCTGCGCA 10617
||||||||| ||||||||||| ||| || ||||| ||||||||||| || || |||||
Sbjct 1608 CGCGGGCACGCTGCTCAAGTCCGCACTGCTGGCGCTGACGGACCAGGGCAAGCCCGCGCA 1667
Query 10618 GGGCGCTATTGA--AACCTTGGGTTTGACGGTTTATGACGCTCAGGGTCAGTTTGTTGGG 10675
|| || || || ||| | || || |||| || ||| ||||| | || |||||
Sbjct 1668 GGCGGCGATGGAGGAAC--TCGGCCTGTCGGTGTACGACATGCAGGGCAACTTCGTTGGA 1725
Query 10676 CTTCAGTCCCTGTTTGGGCAGTTGCAGCAGGCGTCGAAATCGTTGACGCCTGAAATGTAT 10735
|| | | | || || | ||| ||||| | ||| ||| ||||||| || ||||
Sbjct 1726 CTACCGGCACTCTTCGACCAGCTGCAGGATGCGCAGAAGCGCATGACGCCGGAGGCGTAT 1785
Query 10736 CAGGCTGCGACTACGACCCTGTTCGGGTCTGATGC 10770
||||| || || | || ||||| ||||| ||
Sbjct 1786 CAGGCGGCCACCGCCGTGCTCTTCGGCTCTGACGC 1820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 289184614452005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |