Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_026597.1 Length=63334 Score E Sequences producing significant alignments: (Bits) Value seq6253 178 5e-40 >seq6253 Length=4700 Score = 178 bits (196), Expect = 5e-40 Identities = 374/550 (68%), Gaps = 12/550 (2%) Strand=Plus/Minus Query 44026 CTGACTCTCACCGATCTGTTCTGTGGCGCTGGCGGTTCGAGCACCGGCGCGATCGAGATC 44085 || || ||| |||| | ||||| || || ||||| || |||||| || |||| || Sbjct 4473 CTCACCCTCTCCGACTTCTTCTGCGGTGCCGGCGGATCCTCCACCGGAGCACTCGACGTC 4414 Query 44086 CCCGGTGTGGAGGTTCGCGTCGCGTCGAACCACTGGGACCTGGCCGTCGAAACGCACAAC 44145 ||||| || || || |||| ||| | | ||||||||| || ||||||||||| ||| | Sbjct 4413 CCCGGCGTCGACGTCCGCGCCGCCGCCACCCACTGGGATCTCGCCGTCGAAACCCACCAG 4354 Query 44146 ACGAACCACCCCGACGCCGACCATGTGTGCGCCGATCTGTCGCAGATCGACCCGCGCCGG 44205 ||||||| |||||||| || | |||||||| | ||| ||| ||| || | Sbjct 4353 CGCCACCACCCGGACGCCGAACACATCTGCGCCGACATCAGCCAGTACGAGCCGAGCTTG 4294 Query 44206 TTCCCGCGCACCGACATCCTGTGGGCGAGCCCGGAGTGCACGAATCACTCGGTGGCCAAG 44265 ||||| | ||| ||| || ||| ||| ||||| | ||| ||||||| || Sbjct 4293 TTCCCCCACACGGACCTCGCCTGGTTCTCCCCCTCCTGCACCAGCCACACGGTGGCGCAG 4234 Query 44266 GGCCGAAAGCGCGT--CGACTCG-CAGCCCGATCTGT--TCGGCGAGGTGC---TGCCCG 44317 ||| | || ||| |||| | | ||| | || |||| || | | |||| Sbjct 4233 GGC--ATGGCCCGTGCCGACCGGGCCGCCGCCTACGTCCTCGGAGAAACCCCCCTCCCCG 4176 Query 44318 ACGCGGCGGCTGAGCGGTCCCGCGCCACGATGTGGGACGTGCCCCGGTTCGCCGAGGCGC 44377 ||| ||| || || ||||||||||| |||||||||||| || ||| ||||| | Sbjct 4175 ACGACGCGCACGAACGATCCCGCGCCACCATGTGGGACGTGGTGCGCTTCACCGAGTACC 4116 Query 44378 ATCGCTACCAGGCCGTCATCGTCGAGAACGTCGTGGACGCGTGGCACTGGCAGCCGTTCC 44437 | | |||| || ||||| |||||||||||| || | | ||| ||| |||| Sbjct 4115 ACCACTACGCCGCGGTCATTGTCGAGAACGTCACCGAGGTCACCAAGTGGGCGCCATTCC 4056 Query 44438 AGGCGTGGCTGATGGCGATGGACTCGCTGGGCTACGAGCACCACATCGTGTTCCTGAACT 44497 |||||| | ||||||||||| |||| |||||| |||||| ||| || | || ||| Sbjct 4055 CCGCGTGGATCATGGCGATGGAAGCGCTCGGCTACAAGCACCGCATTGTCATGCTCAACA 3996 Query 44498 CGATGCACGCGCAGGC-GTTCGGGCCGGGTGCGCCGCAGTCACGGGACCGCATGTACGTG 44556 |||||||| | | | || ||| || | || |||| || || ||||| | ||| Sbjct 3995 GCATGCACGC-CGGCCTGTACGGCCCCGCCGCCGCGCAATCCCGCGACCGGTTCTACTGC 3937 Query 44557 GTGTTCTGGC 44566 |||||||||| Sbjct 3936 GTGTTCTGGC 3927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202430189576975