Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_026598.1 Length=58211 Score E Sequences producing significant alignments: (Bits) Value SEQ24884 163 1e-35 SEQ26880 86.0 2e-12 >SEQ24884 Length=1939 Score = 163 bits (180), Expect = 1e-35 Identities = 134/163 (82%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 23800 TGGTGCGCGCAGATCGGGCACGAGTCGGGCGGCCTGTACTACATGGAGGAAATCGCCGAC 23859 ||||||||||||||||| |||||||||| || || |||||||||||| |||||||| Sbjct 1431 TGGTGCGCGCAGATCGGTCACGAGTCGGCGGGACTCCGGTACATGGAGGAACTCGCCGAC 1372 Query 23860 GGCAGCGCCTACGAGGGCCGCCTCGACCTGGGCAACACGCAGCCGGGCGACGGTAAGCGG 23919 ||| ||||||||||| ||| |||||| |||||||||||||| || || || || || Sbjct 1371 GGCTCGGCCTACGAGGGGCGCTCCGACCTCGGCAACACGCAGCCCGGTGATGGGCAGAGG 1312 Query 23920 TTCAAGGGCCGCGGCCCTATCCAGATCACCGGCCGGTCGAACT 23962 |||||||| |||||| |||||| ||||||| ||| |||||| Sbjct 1311 TTCAAGGGGTCCGGCCCGATCCAGCTCACCGGGCGGGCGAACT 1269 >SEQ26880 Length=5820 Score = 86.0 bits (94), Expect = 2e-12 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 12600 GGGTTCAAGCCGGGCCTCGGCCCCAAGGGCTCGCTGAGCGTC--GGTTGGTTCAACGGCG 12657 || |||| | |||| ||||||| ||||| || | ||| || ||| | ||||| | Sbjct 2438 GGATTCACGATGGGCAACGGCCCCTCCGGCTC-CT-ACCGTATTGGCTGGATGAACGGGG 2381 Query 12658 GGCCGTATGGCGGCCATACAGCGGCCACCCTGCCCGACGGCACTCATTTCGAGATGGGCG 12717 | ||| |||||||| || | | ||||||||| |||||||| | | |||||||||| Sbjct 2380 GTCCGGGAGGCGGCCACACTTCCGGCACCCTGCCGGACGGCACCAACGTGGAGATGGGCG 2321 Query 12718 GCGCCCGCGGCGACGGGCAGTTCGGCGG 12745 | ||||||||| |||| ||| ||||||| Sbjct 2320 GAGCCCGCGGCAACGGCCAGATCGGCGG 2293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186051681485730