Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq61 174 2e-38 SEQ10860 118 1e-21 seq4710 96.9 4e-15 seq4983 84.2 2e-11 >seq61 Length=55249 Score = 174 bits (192), Expect = 2e-38 Identities = 1146/1822 (63%), Gaps = 58/1822 (3%) Strand=Plus/Plus Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584 || ||| | || ||||| ||| || ||| ||||| || ||||||||| || | ||| Sbjct 26210 TATTTGCTAAAGATCAATGGCAAAATCGCCGAACGTCCGCAGCACATGCTGATGAGAGTG 26269 Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644 ||| | || || || ||||||||||| || |||| | || || ||| ||| ||| Sbjct 26270 GCGATTGGAATCCATGGCGAAGACATCGATTCCGCTGTCGAGACTTAC--AAT-CTGTTA 26326 Query 7645 TTGAAAC---AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCT 7701 | | ||| | |||||||| || ||||| || | ||||| || | ||| || || Sbjct 26327 TCGGAACGCTATTTTACGCATGCATCGCCAACGTTATTTGCTGCTGCCACCAATCGTCCC 26386 Query 7702 CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAA- 7760 || |||| |||||||| | |||| ||| || |||||| ||||||| ||| Sbjct 26387 CAGATGTCATCGTGTTTCCTTTTAACAATGGTTTCCGATTCCATCGAAGGCATTTTCAAG 26446 Query 7761 CACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAA 7820 || | || | || || | || ||||||| || || || || || || || || | Sbjct 26447 TCCGTCGAGC-AGTGTGCAATGATCTCCAAATCCGCTGGTGGCATTGGGCTCAATGTGCA 26505 Query 7821 CGACGTGCGCGCCAACGGTAGCCGCATC-GTGTCCACCAACGGAAAAGCCAGCGGTTTAG 7879 | || ||||| || | | ||| ||| ||| || || | | | ||||| | Sbjct 26506 TTGTATTCGTGCCAAGGGCACCTCGATCTGTG-GCACTAATGGCACTTCAAATGGTTTGG 26564 Query 7880 AGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCA---GGGGGGAAAGC 7936 ||||||| | | ||||| ||||| | || || |||| || || || || |||| Sbjct 26565 TGCCCATGCTCAGAGTGTTTAATAATGTGGCTCGTTATGTCGATCAAGGTGGCGGCAAGC 26624 Query 7937 GCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGC-TA 7995 | |||||| |||||| || |||| || ||||| | || || | | ||| | | Sbjct 26625 GACCAGGCGCTTTTGCCATTTACCTGGAACCTTGGCATTCCGATATCTTTG-AGTTCTTG 26683 Query 7996 AATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTG 8055 | || |||| ||| ||||| || ||| || ||||| |||| || ||| Sbjct 26684 GACCTCAAAAAGAACACGGGCAAGGAAGAGCACAGAGCTCGTGATCTCTTCTACGCCTTG 26743 Query 8056 TGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGC 8115 ||| | |||||||||||||||| ||| || | | | | | |||||||| |||| Sbjct 26744 TGGATACCCGATCTGTTTATGAAGCGTGTGGAGGCCAATGAGGATTGGTCGCTGTTGTGT 26803 Query 8116 CCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAA 8175 || | || || || || |||||| || | ||||| | |||| | | Sbjct 26804 CCTCACAAGTGTCCCGGCTTGGAAGACGTTTGGGGGGATGACTTTGAGAAGCTGTATACA 26863 Query 8176 CAATACGAACACGACGG-CGCGTA---CGTGCGGCAAGTGAAAGCGCGCGACCTGCACCG 8231 | ||||| ||| || |||| | |||| | | ||||| | || Sbjct 26864 AAGTACGAGAGCGAGGGTCGCGCAAATCGTGTG----ATTAAAGCACAAACTCTTTGGTA 26919 Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 |||||| | |||| |||| || || || | ||||||||||| | ||| ||| |||| Sbjct 26920 TGCCATTGTTGAATCTCAAGTTGAGACTGGCACTCCGTACATGCTCTTCAAGGACTCTTG 26979 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 |||| || |||||||| || || |||||||| |||||||| || ||| |||| Sbjct 26980 CAACAGGAAGAGCAATCAGCAGAATGTTGGCACCATCAAATGCAGCAACCTCTGCACTGA 27039 Query 8352 AATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT 8411 |||||| | || || ||||| || | ||||| |||||| | || ||| | || Sbjct 27040 AATTGTTGAATATTCGGCACCCGATGAGATTGCCGTCTGCAATTTGGCATCGATAGCCTT 27099 Query 8412 AAACGCGTTCGTTGATCGACGCTCA---AACACTTACGACTTTGAACAATTGAA-AAACG 8467 || ||| || ||| ||| || || | ||| || | || |||| || Sbjct 27100 GAATATGTTTGT-----GAC-TTCAGAGAAAACATTCGATTTCAAGAAACTGAAGGAAGT 27153 Query 8468 CCGTGCAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGG 8527 | || || | | | ||||| | ||||||||| |||||| ||||| || Sbjct 27154 TACTAAAACTGTCACCA-GAAATTTGAACAAAATCATTGATATCAATTACTATCCGCTGC 27212 Query 8528 AAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGG 8587 || || ||| || | | || | ||| ||||| | ||||| || || | | Sbjct 27213 CCGAGGCAAAGAAATCCAATTTAAGACATCGTCCCATTGGCATTGGCGTTCAGGGCTTTG 27272 Query 8588 CCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCA-TGCTCAAC 8646 ||||||| || || |||| | ||||| || || | |||| || | ||||||| Sbjct 27273 CCGACGCCTTAATTCTGATGCGTTTTCCCTATGAGAGTGACAAAGC-CGTATTGCTCAAT 27331 Query 8647 ATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGA 8706 | || ||||| | || || || || | || ||||| ||| | || || | | Sbjct 27332 CAGCAGATCTTCGAAACCATCTACTATGGTGCCCTTGAGGCCAGTTGTGAGCTGGCTCAA 27391 Query 8707 GAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATAC 8766 | || | || ||| | ||||| || | || | ||| ||||| |||| ||| Sbjct 27392 AAGGACGGTCCCTATGAAACCTACGCTGGTTGTCCGGTGAGCAAGGGAATTCTGCAGTAC 27451 Query 8767 GACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATT 8826 || |||||| | || ||||| | ||| |||||| | | | ||| |||| Sbjct 27452 GATATGTGGGACAAGACACCCACAAGCCTTTGGGATTGGACTGCTCTAAAATTGAAAA-- 27509 Query 8827 GCTCAATTCGGTTTGC----GCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGAC 8882 |||| | | || | || |||||| | || ||| |||||||| || | || Sbjct 27510 --TCAAAGAGCATGGCGTTAGAAACTCGCTGCTTGTAGCTCCAATGCCCACGGCATCTAC 27567 Query 8883 TGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAG 8942 ||| || || ||||| || || || ||||||||||||| || ||| | ||| || Sbjct 27568 TGCCCAGATCATGGGTAATAATGAGTCCTTTGAGCCGTATACTTCAAACATTTACACCAG 27627 Query 8943 ACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGA 9002 || || ||| |||| || || || | |||| ||||||| |||| || || | ||| Sbjct 27628 GCGCGTTTTGTCCGGAGAGTTCAATGTGGTAAATCATCATTTGTTGCGGGATTTAACCGA 27687 Query 9003 AGCGGGCGTTTACGACGACAAAATGCGCGATGCCATC-GTGGAAGCCAACGGCAGCGTTC 9061 | | | | || || | ||| || ||| || || | ||| | | | Sbjct 27688 ACTAGATTTATGGGATGATGACATGAAGAATCAAATCATTGCCAGTC-GTGGCTCCATAC 27746 Query 9062 AGAACATTGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAA--- 9118 | ||||| || | | ||||| | | || || || |||||||| ||||||| Sbjct 27747 AAAACATCGAATCCATTCCTCAGGAAGTACGGGATCTTTACAAAACCGTCTGGGAAATCT 27806 Query 9119 ---TGAAGCAAAGCACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGA 9175 ||||| || | ||| ||||| || ||| | || ||||||||||| |||| Sbjct 27807 CGGTGAAGTCAACC------ATCAAGATGGCAGCTGATCGCGGTGCTTTTATTGACCAGA 27860 Query 9176 GTCAATCTTTTAACGTGTTCGTAGCCGCACCAACTTACGCTTTGATGTCCAGCATTCATT 9235 ||||||| || ||| | ||| |||| ||| | |||| | | | |||||||| Sbjct 27861 GTCAATCATTCAACATTCACGTTGCCGAACCCAACTACGGCAAGTTAACATCCATTCATT 27920 Query 9236 ATTTAACTTGGAAAATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCG 9295 || | ||||| || | || ||||| ||||| ||| |||||||||| || || | Sbjct 27921 TCTTCTCGTGGAAGGCAGGCCTCAAGACAGGAATGTATTATCTGCGCACAAAGCCAGCTG 27980 Query 9296 CTGAACCTATCAAATTTACAGT 9317 | | |||| |||| ||||| Sbjct 27981 CCAATGCTATTCAATTCACAGT 28002 >SEQ10860 Length=7223 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| | || || || ||||| || ||||| ||| || ||| | Sbjct 1463 AGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGC 1522 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || ||||| ||||| ||||||||||| ||||| || || || |||||| Sbjct 1523 CCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCT 1582 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || |||||| || | || || |||| ||| || || ||||| Sbjct 1583 TTGTCCTGAATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTG 1642 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || | ||||||||||| |||||||| Sbjct 1643 ATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 >seq4710 Length=78879 Score = 96.9 bits (106), Expect = 4e-15 Identities = 156/223 (70%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTA-GCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTG 134554 || |||| ||| | ||| | | || || ||||| || ||||||||||| | ||| | Sbjct 8612 AGACGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCG 8671 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || ||||| ||||| || || || | |||||||||||| || || || ||||| Sbjct 8672 ACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTC 8731 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| || || || || || | || || || | ||||| || || || Sbjct 8732 CTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGT 8791 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | || || ||||| |||||||||||| Sbjct 8792 GATGGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCATTTTG 8834 >seq4983 Length=3163 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || ||||| || |||||||||||| | ||| || Sbjct 653 AGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGA 712 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||| || || || || ||||||||||||||||| || || || || || Sbjct 713 CCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCC 772 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | || || || | || || || | ||| Sbjct 773 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACCTCCAAGGTA 832 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || || || || || || || || || ||||| || Sbjct 833 ATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCATATT 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505107132584600