Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value SEQ14988 104 3e-17 >SEQ14988 Length=19721 Score = 104 bits (114), Expect = 3e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 161583 TAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGT 161642 |||| ||||| |||| | || |||||||| ||||||| ||||||||||| || |||| Sbjct 2841 TAGGCAATCTGGACTCGAAGCGCGATTGGGGCCATGCTGCCGACTATGTGGAAGCAATGT 2782 Query 161643 GGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATT 161702 || |||||||||||| || || || | ||||||||||||||||| || | | || Sbjct 2781 GGATGATGTTACAACGCGATACCCCAGCGGACTATGTGATTGCCACCGGGGAGACGCATA 2722 Query 161703 CAGTGAAGGACTTTGTAGAGGCATCTGCTGAATACTTTGGTATGAAGATTGAGTGGCAGG 161762 ||| || ||||| |||||| | | || ||||| |||||| ||||| | Sbjct 2721 GTGTGCGTGAATTTGTGGAGGCAGCCTTCAAGCACATTGGTCGTGAGATTGTGTGGCGTG 2662 Query 161763 GTGAAGGATTGGATGAAGTGGG 161784 | | || |||| ||||| || Sbjct 2661 GCAAGGGCGTGGAGGAAGTAGG 2640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729508932447400