Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 111 2e-19
seq735 96.9 4e-15
>seq2872
Length=9359
Score = 111 bits (122), Expect = 2e-19
Identities = 289/436 (66%), Gaps = 6/436 (1%)
Strand=Plus/Plus
Query 129742 CTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTT 129801
||||||||||||||| || || || ||||| ||| ||||||| || ||||| ||
Sbjct 3007 CTTCTCGAAGAAGTTGGTTTTGCCATCCAAAGAGATCATCTCCATGAACGAGAATGGATT 3066
Query 129802 CTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGACGTAC 129859
||||| ||| ||| |||| |||||||| || | || ||||| | ||| ||
Sbjct 3067 CTTTGTGTTGTAAATCTTGC--CCACTCCAAGCTCAACCAATAGGCGATCAGCGACAAAC 3124
Query 129860 TCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCC 129919
|| || || || |||||| | ||||||| || || | ||| || ||||| ||
Sbjct 3125 TCGATATATTCGGACATCAGAGCACAGTTCATGCCAATCAAGTTGACGGGCAGCGCATCG 3184
Query 129920 AAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCTCCGTG 129979
|| |||| ||| |||||| |||||| ||| | ||| | ||| |||
Sbjct 3185 GTGAGGAACTCCTGCTCAATAGTCACAGCATCCGTTATGATTTCAATGATGCGTTCCCGA 3244
Query 129980 CCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCTGGTGGAGACCCTC 130038
| ||| | ||| | || | || ||| | ||| ||||| || || ||||| ||
Sbjct 3245 CTAGG-CCGCTGCACCAAATGTTGGAACATAAGCACCGCAAAGTCACAATGCAGACCTTC 3303
Query 130039 GTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAA 130098
|| || ||||| | ||| || ||||| || || ||||| || || ||||||||||
Sbjct 3304 ATCGCGAGAGATCAATTCGTTGGAGAATGTAAGTCCAGGCATAAGTCCACGCTTCTTCAG 3363
Query 130099 CCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAA 130158
|||||| || | ||| ||| ||||||||| || || ||| || || ||||
Sbjct 3364 CCAGAAGATGGATGCAAAGCTCCCACTGAAGAAGATGCCTTCAACAGCAGCAAAAGCAAT 3423
Query 130159 GAGACGCTCAGCAAAG 130174
| ||| ||| |||||
Sbjct 3424 AATACGTTCACCAAAG 3439
>seq735
Length=17191
Score = 96.9 bits (106), Expect = 4e-15
Identities = 171/247 (69%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123
|||||| ||||| ||||||| || || |||||||| | |||||| | | ||| || ||
Sbjct 11630 ATCTTTTCCACCGGTGAGACGAGTACCGAATTGACCGCGTGGCTCTAACAAATTAATGTT 11571
Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 179182
||| || |||| |||| | ||||| || ||||| || || || || ||||||||||
Sbjct 11570 GTTCGATCCCACATAGTTCTGCGCCAAATTCACAATGGTCATTTGC-AGCGAGACTTCAC 11512
Query 179183 CGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCAT 179242
| ||||| || | ||| | || || || | ||| || ||| || ||||| | |||
Sbjct 11511 CATGATGATACGATGACATTTCGGCAACGGAACCCGACAGCTGGGCAACCTTAACTTCAC 11452
Query 179243 CCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAGGCCGT 179302
|||| || | || |||| | |||| ||||| | || |||||| | ||| |
Sbjct 11451 GCTTGTCATTACGCTTAAAACACGTAAACATAACCTTCCGCTGACCAGGCTTTAAGCCAT 11392
Query 179303 CGGCCAT 179309
| ||||
Sbjct 11391 CTACCAT 11385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618078788063800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |