Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq61 183 4e-41
>seq61
Length=55249
Score = 183 bits (202), Expect = 4e-41
Identities = 596/912 (65%), Gaps = 23/912 (3%)
Strand=Plus/Plus
Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755
|| |||||||||| ||| | ||||| || ||||| || |||||| | || |||| | |
Sbjct 26723 CGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGTTTATGAAGCGTGTGGAGGCCAAT 26782
Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT---GGGT 104812
| ||||||| || || ||||| ||||| || || || || | ||| |||
Sbjct 26783 GAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCGG---CTTGGAAGACGTTTGGGGG 26839
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872
|| || ||||| || || |||||||||||| || ||||| || | | | |
Sbjct 26840 GATGACTTTGAGAAGCTGTATACAAAGTACGAGAGCGAGGGTCGCGCAAATCGTGTGATT 26899
Query 104873 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932
||| | | ||| | || ||| | | |||||| |||||||| || || |||
Sbjct 26900 AAAGCACAAACTCTTTGGTATGCCATTGTTGAATCTCAAGTTGAGACTGGCACTCCGTAC 26959
Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992
||||| | ||| ||| | || ||| ||||| ||||| ||||| | || |||||
Sbjct 26960 ATGCTCTTCAAGGACTCTTGCAACAGGAAGAGCAATCAGCAGAATGTTGGCACCATCAAA 27019
Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052
| ||| ||||| || ||||| | |||| | | | ||||||| || || ||
Sbjct 27020 TGCAGCAACCTCTGCACTGAAATTGTTGAATATTCGGCACCCGATGAGATTGCCGTCTGC 27079
Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 105112
|| | ||||| || || | | || |||| | |||||| || |||| ||||
Sbjct 27080 AATTTGGCATCGATAGCCTTGAATATGTTTGTGACTTCAGAGAAAA---CATTCGATTTC 27136
Query 105113 GAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGA 105172
| ||||| | |||||||| ||||||||||||| ||| | |||| | | |||||||
Sbjct 27137 AAGAAACTGAAGGAAGTTACTAAAACTGTCACCAGAAATTTGAACAAAATCATTGATATC 27196
Query 105173 AATTTTTACCCCGTTG--AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 105230
|||| || ||| || || || ||||| ||| | ||||| ||||| |||||
Sbjct 27197 AATTACTA-TCCGCTGCCCGA-GGCAAAGAAATCCAATTTAAGACATCGTCCCATTGGCA 27254
Query 105231 TCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACG 105290
| || |||||||| | || || | || ||||| || | | ||| |||
Sbjct 27255 TTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCGTTTTCCCTATGAGAGTGACA 27314
Query 105291 AAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGA 105350
|||| ||||| || || || || ||||| || | | || |||||||| |
Sbjct 27315 AAGCCGTATTGCTCAATCAGCAGATCTTCGAAACCATCTACTATGGTGCCCTTGAGGCCA 27374
Query 105351 GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 105410
||| ||| |||| | || ||||| |||||||||| | |||| ||| | | |
Sbjct 27375 GTTGTGAGCTGGCTCAAAAGGACGGTCCCTATGAAACCTACGCTGGTTGTCC-GGTGAGC 27433
Query 105411 AAGGG-GTGCTTCAATTTGATATGTGGGA-AGGTGAGAC-CAAGCTTCACTACGACTGGG 105467
||||| | || || | ||||||||||| | | | | ||||| | | || |||
Sbjct 27434 AAGGGAATTCTGCAGTACGATATGTGGGACAAGACACCCACAAGC--CTTTGGGATTGGA 27491
Query 105468 AAGCTCTCAA--GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525
||||| || ||| ||||| ||| | || || | ||| || || | |||||
Sbjct 27492 CTGCTCTAAAATTGAA--AATCAAAGAGCATGGCGTTAGAAACTCGCTGCTTGTAGCTCC 27549
Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585
|||||| || || || || || || ||| ||||||||||||| | |||||| || || ||
Sbjct 27550 AATGCCCACGGCATCTACTGCCCAGATCATGGGTAATAATGAGTCCTTTGAGCCGTATAC 27609
Query 105586 GACGAACATCTA 105597
| ||||| ||
Sbjct 27610 TTCAAACATTTA 27621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582924659510200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |