Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq3808 95.1 9e-15
>seq3808
Length=15542
Score = 95.1 bits (104), Expect = 9e-15
Identities = 195/288 (68%), Gaps = 8/288 (3%)
Strand=Plus/Minus
Query 111655 CGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGC 111714
|| ||||| || || || ||||| || ||||| || | || || ||| || ||
Sbjct 5984 CGCTTAATGTTAAGCTTAGGAAATGGACGAGGCTGCCGCTTTAGTTGCTGTTGCAATGGT 5925
Query 111715 TGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCC 111774
| | ||||| | ||| ||||| | |||||| || |||| || || | ||||| |
Sbjct 5924 TCCACATGATTAAGATACACATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGCTTC 5865
Query 111775 AAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGC 111834
|| || || | || ||||||||||| ||||| || ||| || |||||||| ||
Sbjct 5864 AATCCGGTCACATGGGCAATCATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAAGGA 5805
Query 111835 ACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT------TATTT 111888
|| || || ||||| ||| | || || || || ||||| || |||| | |
Sbjct 5804 ACCCCGAGCCCCATGTCTGCACTTCGCTGGTACAGATGACAGGAGAGTTCTCCTCGAGAT 5745
Query 111889 TGTGACACATAAAATTG-ACAAAGTACATGACAAGGAGGCAATGCCAT 111935
|| |||||||| || || || ||| | || |||||||||| ||||||
Sbjct 5744 TGCGACACATAGAACTGCACCAAGCA-GTGGCAAGGAGGCAGTGCCAT 5698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391725363930115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |