Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 104 3e-17
seq61 100 3e-16
SEQ28400 95.1 1e-14
>seq2872
Length=9359
Score = 104 bits (114), Expect = 3e-17
Identities = 351/534 (66%), Gaps = 21/534 (4%)
Strand=Plus/Minus
Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTC 59672
|| |||||| ||||||| || | || || || ||| ||| ||||||| ||||||
Sbjct 3801 TCGTTCTGGACCGTCGAAGAAGTGGATCTGTCCAAGGACATGACTGATTGGGCCAAGCTT 3742
Query 59673 AATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGA 59732
| | | |||| |||||||| | || |||||||||| || || |||||||
Sbjct 3741 ACGGATAATGAGCGTCATTTCATATCGCATGTGTTGGCCTTCTTTGCTGCTTCTGATGGA 3682
Query 59733 ATTGTGATGGAAAATATAGACATGAACTTTT---CCAAGGATGTCCAGATTGCCGAGGCC 59789
||||| | |||||| | | | |||| ||| ||||| | || ||| | |||||||
Sbjct 3681 ATTGTTAACGAAAATCTGGTC--GAACGTTTTAGCCAAGAA-GTGCAGGTGACCGAGGCA 3625
Query 59790 CGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTC 59849
|| | || || | | ||| || ||| | | || ||||| | |||| |
Sbjct 3624 CGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTGCATTCCGAAATGTACAGTGTG 3565
Query 59850 ATGATCGATAAGTTGGTCAAGGATCCGGAAGAGA-AGGCTGGTCTGTTCCGTGCCATAGA 59908
| || || | | ||| |||||| | || || || ||| ||| |||||| ||
Sbjct 3564 CTCATTGACACCTATATCAGGGATCCTCATCAGCGAGACTA-TCTCTTCAATGCCATTGA 3506
Query 59909 GACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGC 59968
||| || || ||||| | || ||||| ||||| | ||||| | | | ||
Sbjct 3505 AACGATGCCGGCTGTTAAGCGGAAGGCAGACTGGGCTCTTTCTTGGATCTCTTC-GAAGG 3447
Query 59969 AT--CA--TTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCT 60023
| || |||| ||||| | || |||||||| ||| || ||||| ||||||||| |
Sbjct 3446 CTGCCAACTTTGGTGAACGTATTATTGCTTTTGC-TGCTGTTGAAGGCATCTTCTTCAGT 3388
Query 60024 GGCTCGTTCTGTGCT---ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080
|| | || ||| || |||||||| || |||||||| || ||||| || || |
Sbjct 3387 GG---GAGCTTTGCATCCATCTTCTGGCTGAAGAAGCGTGGACTTATGCCTGGACTTACA 3331
Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTG 60134
||||||||||| |||| || || || || || || ||| || ||||| |||
Sbjct 3330 TTCTCCAACGAATTGATCTCTCGCGATGAAGGTCTGCATTGTGACTTTGCGGTG 3277
>seq61
Length=55249
Score = 100 bits (110), Expect = 3e-16
Identities = 339/528 (64%), Gaps = 0/528 (0%)
Strand=Plus/Minus
Query 79056 CGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCA 79115
|||||||| ||||| ||||| |||| || || ||| || | ||||| |||||
Sbjct 27091 CGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCAGTGCA 27032
Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175
| || | ||||||||||| | |||| ||| ||||||||| ||| || | |||
Sbjct 27031 GAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTC 26972
Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGAT 79235
|||| || ||||||||| || || |||||||| ||| | | || | | | ||| |
Sbjct 26971 CTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAG 26912
Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTC 79295
| || | || || ||||||| ||||| | |||| ||
Sbjct 26911 AGTTTGTGCTTTAATCACACGATTTGCGCGACCCTCGCTCTCGTACTTTGTATACAGCTT 26852
Query 79296 GTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTG 79355
| || | ||||| | || || || ||| || |||| ||| || |||| |||
Sbjct 26851 CTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAGCGA 26792
Query 79356 CCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAA 79415
||| ||||| | ||| || || ||| || || || || ||||||| ||| |||
Sbjct 26791 CCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTAGAA 26732
Query 79416 GAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCAT 79475
||| || || | ||| || | |||| |||| || || | || || |
Sbjct 26731 GAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCCAAGAACTCAAA 26672
Query 79476 GATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCC 79535
||| |||| ||||| || ||||| || ||||| || | || ||||||||||| ||
Sbjct 26671 GATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGCTTGCCGCCACC 26612
Query 79536 CTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCAC 79583
|| | ||| || || ||| || || || |||| ||||||||||||
Sbjct 26611 TTGATCGACATAACGAGCCACATTATTAAACACTCTGAGCATGGGCAC 26564
>SEQ28400
Length=5104
Score = 95.1 bits (104), Expect = 1e-14
Identities = 272/412 (66%), Gaps = 16/412 (4%)
Strand=Plus/Minus
Query 166101 TCGGTACTGGACCGGCCGGGACCGGTAAGACGCTCCTGGCATG----CAACGCCGGTTCT 166156
|||| | ||||||||||| ||||| ||||| |||||| || ||| ||||
Sbjct 1321 TCGGCATCGGACCGGCCGGCACCGGCAAGACCTACCTGGC-TGTCGCCAAGGCCGTG--- 1266
Query 166157 CACGCACTGGCGACGCGCAAGGTTGAACGTCTGATCCTGACGCGACCGGCCGT-GAGCGT 166215
|| || || || || |||| || | ||||| || || || ||||| ||| |
Sbjct 1265 CAGGCGCTCCAGAAGCAGCAGGTCACCCGCATCATCCTCACCCGGCCCGCCGTCGAG-GC 1207
Query 166216 CGAGGAGCAGCACGGGTTCCTTCCCGGCAGTCTCGAGCAGAAGATGGAGCCGTGGACTCG 166275
| |||| ||| ||| ||||| ||||||| |||| ||||||| | || | ||
Sbjct 1206 GGGGGAGAAGCTCGGCTTCCTGCCCGGCACACTCGGTGAGAAGATCGGCCCCTACCTCCG 1147
Query 166276 ACCCATGTTCGACGCCCTGTACCGGTACATGAGC---CCTAAGAAGGTTCGGGATCTCAT 166332
|| ||| |||||| ||| || ||||| | || | | | || | |||||
Sbjct 1146 GCCGTTGTACGACGCGCTGG---GGGACATGCTCGACCCGACGGACGTCCCCCGGCTCAT 1090
Query 166333 GGAAAATCACGTCATCGAGATCTGTCCTCTGGCGTACATGCGCGGTCGGACGTTCGACAA 166392
|| |||||||||||| || ||||||||||||||||| || || || ||
Sbjct 1089 CGAGTCCGGGGTCATCGAGATCGCGCCGCTGGCGTACATGCGCGGACGCACCCTCAACGG 1030
Query 166393 CGCCTGGATTATCGGGGATGAGATGCAGAACTCGACGCCGGGTCAGATGAAGATGCTTCT 166452
|||| | ||| || ||| ||||||| | || |||| |||||||||||| | ||
Sbjct 1029 GGCCTTCGTCATCCTCGACGAGGCGCAGAACACCACCCCGGCGCAGATGAAGATGTTCCT 970
Query 166453 GACCCGGATCGGGGAAGGTTCGAAGATGATCGTCGCGGGTGACACGGCCCAG 166504
|||||| |||| || ||||||| ||||| | || ||| | |||||
Sbjct 969 CACCCGGCTCGGTTTCGGCACGAAGATCGTCGTCACCGGCGACCTGTCCCAG 918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548208678301200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |