Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq735 122 1e-22
seq2872 116 4e-21
>seq735
Length=17191
Score = 122 bits (134), Expect = 1e-22
Identities = 189/268 (71%), Gaps = 4/268 (1%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||||||||||| ||||||| ||| || ||||| | ||||| |||||||||||
Sbjct 11656 GTGAAAATGTAACGAGCGCTTGCACAATCTTTTCCACCGGTGAGACGAGTACCGAATTGA 11597
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|| | ||||| || | || | |||||| | |||||| |||| || ||||| || |||
Sbjct 11596 CCGCGTGGCTCTAACAAATTAATGTTGTTCGATCCCACATAGTTCTGCGCCAAATTCACA 11537
Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484
|| || ||| || | |||||||| ||||||| | | || || ||| | |||
Sbjct 11536 ATGGTCATTTGCAGCGAGACTTCACCATGATGATACGATGACATTTCGGCAACGGAACCC 11477
Query 117485 GCCAGCTGAGCCACCTTCATGTCTGAC--GTCAGGTTCTTCTTGAGGCAGGCATAAATCA 117542
| |||||| || ||||| | || | |||| || ||| | || | | | || |
Sbjct 11476 GACAGCTGGGCAACCTTAACTTCACGCTTGTCA--TTACGCTTAAAACACGTAAACATAA 11419
Query 117543 CCTTGCGCTGACTTGGCTTCAGACCATC 117570
|||| ||||||| ||||| | |||||
Sbjct 11418 CCTTCCGCTGACCAGGCTTTAAGCCATC 11391
>seq2872
Length=9359
Score = 116 bits (128), Expect = 4e-21
Identities = 175/247 (71%), Gaps = 5/247 (2%)
Strand=Plus/Plus
Query 74747 CACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAG 74806
||| ||||| || |||| |||||||| | |||||||| || || || | |||
Sbjct 3277 CACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATGTAAG 3336
Query 74807 GCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAA 74866
||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||
Sbjct 3337 TCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCACTGAAGAA 3396
Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGT----GCATCGGAAG 74922
||||||||| ||| ||||| || | || |||| | | || | | || | ||||
Sbjct 3397 GATGCCTTCAACAGCAGCAAAAGCAATAATACGTT-CACCAAAGTTGGCAGCCTTCGAAG 3455
Query 74923 TCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTT 74982
||||||| ||||||| || || || || || || || || | || || || || |
Sbjct 3456 AGATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATGGCAT 3515
Query 74983 GGAAGAG 74989
||||||
Sbjct 3516 TGAAGAG 3522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546900632579000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |