Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4983 87.8 1e-12 SEQ10860 84.2 1e-11 >seq4983 Length=3163 Score = 87.8 bits (96), Expect = 1e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || || || |||||| || ||||| || || || || || || Sbjct 653 AGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGA 712 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | || || ||||| || || |||||||| || || || || | |||||| Sbjct 713 CCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCC 772 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | || || || | ||| || |||| ||| Sbjct 773 TTGTCCTGGATC-TTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACCTCCAAGGT 831 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || || || || || || || ||||| |||||||| || Sbjct 832 AATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCATATT 873 >SEQ10860 Length=7223 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | |||||| || | || ||| ||||| || || ||||| ||| Sbjct 1454 CCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAA 1513 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| | ||||| | ||| || |||||||| || ||||||||||| || || || Sbjct 1514 AGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGA 1573 Query 34600 ACTCCCTCCTTGTC 34613 | ||| || ||||| Sbjct 1574 ATTCCTTCTTTGTC 1587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314552751962465