Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028662.1
Length=50418
Score E
Sequences producing significant alignments: (Bits) Value
SEQ24884 105 2e-18
>SEQ24884
Length=1939
Score = 105 bits (116), Expect = 2e-18
Identities = 257/384 (67%), Gaps = 13/384 (3%)
Strand=Plus/Minus
Query 6738 CGCCCAGACCGGGCATGAGTCCGCAGGCTTCAACGCCACCGAGGAGTACGCCTCCGGAGC 6797
||| |||| ||| || ||||| || || || || ||||| |||| ||| |
Sbjct 1426 CGCGCAGATCGGTCACGAGTCGGCGGGACTCCGGTACATGGAGGAACTCGCCGACGGCTC 1367
Query 6798 GGCCTACGAGGGCCGCACGGATCTCGGCAACATCCACCCCGGTGACGGGGTCCGGTTCAA 6857
|||||||||||| ||| | || |||||||||| || |||||||| ||| |||||||
Sbjct 1366 GGCCTACGAGGGGCGCTCCGACCTCGGCAACACGCAGCCCGGTGATGGGCAGAGGTTCAA 1307
Query 6858 GGG--CCGCACGTGGATCCAGATCACGGGACGGTCGAACTACACCCAGTTCTCCGATTGG 6915
||| ||| | ||||||| |||| || ||| |||||| | |||| | |||
Sbjct 1306 GGGGTCCGGCC--CGATCCAGCTCACCGGGCGGGCGAACTTCCGGGCGTTCACTCGGTGG 1249
Query 6916 GCGTACCGCAACGGGCTGGTGCCGAACAGCAAGTACTTCGTGGACAACCCGCAGCAGTTG 6975
||| | ||| | || | | | | | | | |||||| || | ||| ||| | ||
Sbjct 1248 GCG--CAGCAGCAGG--GATTC--ACCGACCTGGACTTCGAGGCGCAGCCGGAGCTGGTG 1195
Query 6976 ---ACGGACGTGAAGTGGGCCGGCATCGGCGCTGCCTGGTACTGGACCGTCGCAAGGCCG 7032
|||| ||||| | ||| ||| ||||||||||||| ||||| | |||
Sbjct 1194 CGCTCGGATCCACGGTGGGGGTTCCTCGCCGCGTCCTGGTACTGGACGGTCGCCCGCCCG 1135
Query 7033 TTCATCAACTCGCTGTGCGACAACGCCGACCTCGTCGGGGTCACCAGAGCGATCAACGGC 7092
| ||||| ||| |||||| | || |||| | |||||| | |||||||||||
Sbjct 1134 AACCTCAACGCGCAGTGCGATGCGGATGATGTCGTGGCCGTCACCCGGTCGATCAACGGC 1075
Query 7093 GGCACGAACGGTCTGGAAGACCGG 7116
|| || ||||| |||| ||||||
Sbjct 1074 GGAACCAACGGCCTGGCGGACCGG 1051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 161127734743800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |