Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028662.1 Length=50418 Score E Sequences producing significant alignments: (Bits) Value SEQ24884 105 2e-18 >SEQ24884 Length=1939 Score = 105 bits (116), Expect = 2e-18 Identities = 257/384 (67%), Gaps = 13/384 (3%) Strand=Plus/Minus Query 6738 CGCCCAGACCGGGCATGAGTCCGCAGGCTTCAACGCCACCGAGGAGTACGCCTCCGGAGC 6797 ||| |||| ||| || ||||| || || || || ||||| |||| ||| | Sbjct 1426 CGCGCAGATCGGTCACGAGTCGGCGGGACTCCGGTACATGGAGGAACTCGCCGACGGCTC 1367 Query 6798 GGCCTACGAGGGCCGCACGGATCTCGGCAACATCCACCCCGGTGACGGGGTCCGGTTCAA 6857 |||||||||||| ||| | || |||||||||| || |||||||| ||| ||||||| Sbjct 1366 GGCCTACGAGGGGCGCTCCGACCTCGGCAACACGCAGCCCGGTGATGGGCAGAGGTTCAA 1307 Query 6858 GGG--CCGCACGTGGATCCAGATCACGGGACGGTCGAACTACACCCAGTTCTCCGATTGG 6915 ||| ||| | ||||||| |||| || ||| |||||| | |||| | ||| Sbjct 1306 GGGGTCCGGCC--CGATCCAGCTCACCGGGCGGGCGAACTTCCGGGCGTTCACTCGGTGG 1249 Query 6916 GCGTACCGCAACGGGCTGGTGCCGAACAGCAAGTACTTCGTGGACAACCCGCAGCAGTTG 6975 ||| | ||| | || | | | | | | | |||||| || | ||| ||| | || Sbjct 1248 GCG--CAGCAGCAGG--GATTC--ACCGACCTGGACTTCGAGGCGCAGCCGGAGCTGGTG 1195 Query 6976 ---ACGGACGTGAAGTGGGCCGGCATCGGCGCTGCCTGGTACTGGACCGTCGCAAGGCCG 7032 |||| ||||| | ||| ||| ||||||||||||| ||||| | ||| Sbjct 1194 CGCTCGGATCCACGGTGGGGGTTCCTCGCCGCGTCCTGGTACTGGACGGTCGCCCGCCCG 1135 Query 7033 TTCATCAACTCGCTGTGCGACAACGCCGACCTCGTCGGGGTCACCAGAGCGATCAACGGC 7092 | ||||| ||| |||||| | || |||| | |||||| | ||||||||||| Sbjct 1134 AACCTCAACGCGCAGTGCGATGCGGATGATGTCGTGGCCGTCACCCGGTCGATCAACGGC 1075 Query 7093 GGCACGAACGGTCTGGAAGACCGG 7116 || || ||||| |||| |||||| Sbjct 1074 GGAACCAACGGCCTGGCGGACCGG 1051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161127734743800