Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028665.1 Length=56982 Score E Sequences producing significant alignments: (Bits) Value SEQ34602 87.8 7e-13 >SEQ34602 Length=2152 Score = 87.8 bits (96), Expect = 7e-13 Identities = 134/186 (72%), Gaps = 5/186 (3%) Strand=Plus/Minus Query 53933 TTCGACATTGAGAGCACCGGCCCGGACCCGCTGACCGACCGGATCGTCACC-GCGACGAT 53991 ||||| | |||| |||||| || |||||| |||||| || ||||| ||| ||| || | Sbjct 1701 TTCGATCTGGAGACCACCGGGCCCGACCCGATGACCGCACGCATCGTGACCAGCG-CGCT 1643 Query 53992 TCTCGAAATCCATCCGACGCGCGGCGTCGAGGTGCACGAGTGGCTGCTCGACCCCGGTAT 54051 || ||| | || | ||| ||| || | | || || || |||||| | Sbjct 1642 CATCACCATCAAGGGACCGAACCGCGACGACCTGGA--ACTGCTCGC-CGCCCCCGGCGT 1586 Query 54052 CGAGATCAGCGAGGGCGCGACCAAGGTGCACGGCATCAGCACCGAGCACGCACGCGAGCA 54111 |||||| ||| |||||||| ||||| |||||||||| ||||||| |||| || ||||| Sbjct 1585 GGAGATCCCCGAAGGCGCGACGAAGGTCCACGGCATCACCACCGAGTACGCCCGGGAGCA 1526 Query 54112 CGGCCG 54117 |||||| Sbjct 1525 CGGCCG 1520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182121034681440