Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028677.1
Length=46596
Score E
Sequences producing significant alignments: (Bits) Value
seq963 87.8 5e-13
>seq963
Length=26998
Score = 87.8 bits (96), Expect = 5e-13
Identities = 208/309 (67%), Gaps = 8/309 (3%)
Strand=Plus/Plus
Query 1886 TCGCAGCCCCGGACGGTACTCCGTTCTACGCCTGCCAGGCCGGTACGGTTCAGTTCATCG 1945
|||| ||| | ||||| || || |||||||||||| | || || || | | |||||
Sbjct 21955 TCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGGGGCACAGTCCTCTACATCG 22014
Query 1946 GCTCTGCAACTGGTTACGGCCAGTGGCTGGTTATCGACTCGTCCGATGAC---GAAGGCA 2002
|| | || | || ||||| |||||| | || ||||| | ||| ||| || |||
Sbjct 22015 GCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGAC-CACCCG--GACAGTGAGGGCG 22071
Query 2003 GCGGCTGTG-TTGAGTACGGCCACATGTGGAACGCCCGAGCTACCGGCCTTTCGGTCGGT 2061
||||| ||| ||||||||||| |||||| ||||| || || ||||| | ||
Sbjct 22072 GCGGC-GTGACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGCAGCAGGGG 22130
Query 2062 GACCACGTCGAGGCCGGCCAACTGATCGGTTATATCGGCAGCAACGGACAGTCCACTGGA 2121
| || || || || || || ||||| || |||| || || ||| | || ||
Sbjct 22131 CAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGGCGACCGGC 22190
Query 2122 CCCCACCTGCACATCACGGTCTGGGAACGCGGATACAACAGTGTCCGTATCGACCCAGAG 2181
|| ||||| ||| |||| || ||||| || | ||| | | || |||||||| |||
Sbjct 22191 CCGCACCTTCACCTCACAGTGTGGGAGCGAGCCTACGGCGGCCAGCGCATCGACCCGGAG 22250
Query 2182 GTCTGGCTG 2190
||||||
Sbjct 22251 ACGTGGCTG 22259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148904030849580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |