Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028678.1
Length=56669
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19605 91.5 5e-14
>SEQ19605
Length=8275
Score = 91.5 bits (100), Expect = 5e-14
Identities = 138/192 (72%), Gaps = 11/192 (6%)
Strand=Plus/Minus
Query 31500 GCCTTGAC-TACTCCCCGCCCTGAAGGACGGGGATTCTCGCAGTCGCCTGCGAGGGTTCC 31558
|| ||||| | ||||||||||| | | ||||||||| || || | || || ||||
Sbjct 1910 GCATTGACCTCCTCCCCGCCCTCACAGGCGGGGATTCCCGGCTTCACAGCCGGGGCTTCC 1851
Query 31559 TGTTTCACAGGCGACTGCC-GATG---GGATGCCC---CATGCGGTCTGACGTCGCCTCC 31611
|| ||| | |||| ||| | || |||| ||| || ||||| ||| ||||
Sbjct 1850 TGCTTCGACGCCGACCGCCTGGTGTCCGGATTCCCGGTCACCTGGTCTTCTGTCAGCTCC 1791
Query 31612 GCAGGCGTTTTGCGTCTCCGCCAGCCCGGCGGCGACAAGGATGTTCTTCGCGGCGTTGAT 31671
||||||||| | ||||||| ||||| |||||| |||||||| | ||||||||||
Sbjct 1790 ACAGGCGTTTCACCTCTCCGCGAGCCCCGCGGCG---AGGATGTTTCTGGCGGCGTTGAC 1734
Query 31672 GTCCCGATCATG 31683
|||||| |||||
Sbjct 1733 GTCCCGGTCATG 1722
Score = 86.0 bits (94), Expect = 2e-12
Identities = 201/303 (66%), Gaps = 3/303 (1%)
Strand=Plus/Minus
Query 32363 CCGTCTTTGATGCGGAATGCGGAGCGGGTGAAGTGCGCGGACTGCCTT---CCGTGGCGG 32419
||||| ||| |||||| ||| ||||| ||| | ||||| | | | | | | |
Sbjct 1051 CCGTCGGTGAAGCGGAACGCGCTGCGGGAGAACTCGGCGGAGCGGCGTGAACTCTTCCTG 992
Query 32420 CTCTTGAAACGCGGGTACTTCGCGAGGCCCTTGAAGAACGCGGCGAACGCCGAATGCTGA 32479
|||||||| || || ||| | | || |||||||| || ||| || |||||
Sbjct 991 CTCTTGAACCGGGGATACCCGGAGGTGCGGTTGAAGAAGCGGGTGAAGGCGTTCTGCTGG 932
Query 32480 TGCCGCAGCGTCTGTTGCAACGGAACCGACGACACCTCAGACAGGAACGCCAGATCCTCG 32539
|||||||| ||||| || | || || || || ||||| || |||| || |||||
Sbjct 931 TGCCGCAGTGTCTGCTGGAGGGGGACGGAGGAGACCTCCCGGAGAAACGAGAGGTCCTCC 872
Query 32540 GTCTTCTTCCACTCCGAGAGAGCAGCGTCGGTCTCCTTGTAGGAGGTCGATTTTTGTTCG 32599
||||||| | | || || || ||| || ||||||||||||| || ||
Sbjct 871 TGTGTCTTCCAGGCGGTCAGCGCCGCCGAGGTGTCGGTGTAGGAGGTCGACTTCGACTCC 812
Query 32600 GTGGTGTAGCGCTGCTGCCGTTCGGCGAGCGTCTTGTTCCACACCAGACGTACGCAGCCG 32659
|||| ||| |||||| | | | || ||||||||| ||||| || ||||| |||
Sbjct 811 ACCGTGTGGCGGGTCTGCCGCAGGTCCAACGCCTTGTTCCAGACCAGTCGGACGCACCCG 752
Query 32660 AAC 32662
|||
Sbjct 751 AAC 749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181119983054310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |