Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028678.1 Length=56669 Score E Sequences producing significant alignments: (Bits) Value SEQ19605 91.5 5e-14 >SEQ19605 Length=8275 Score = 91.5 bits (100), Expect = 5e-14 Identities = 138/192 (72%), Gaps = 11/192 (6%) Strand=Plus/Minus Query 31500 GCCTTGAC-TACTCCCCGCCCTGAAGGACGGGGATTCTCGCAGTCGCCTGCGAGGGTTCC 31558 || ||||| | ||||||||||| | | ||||||||| || || | || || |||| Sbjct 1910 GCATTGACCTCCTCCCCGCCCTCACAGGCGGGGATTCCCGGCTTCACAGCCGGGGCTTCC 1851 Query 31559 TGTTTCACAGGCGACTGCC-GATG---GGATGCCC---CATGCGGTCTGACGTCGCCTCC 31611 || ||| | |||| ||| | || |||| ||| || ||||| ||| |||| Sbjct 1850 TGCTTCGACGCCGACCGCCTGGTGTCCGGATTCCCGGTCACCTGGTCTTCTGTCAGCTCC 1791 Query 31612 GCAGGCGTTTTGCGTCTCCGCCAGCCCGGCGGCGACAAGGATGTTCTTCGCGGCGTTGAT 31671 ||||||||| | ||||||| ||||| |||||| |||||||| | |||||||||| Sbjct 1790 ACAGGCGTTTCACCTCTCCGCGAGCCCCGCGGCG---AGGATGTTTCTGGCGGCGTTGAC 1734 Query 31672 GTCCCGATCATG 31683 |||||| ||||| Sbjct 1733 GTCCCGGTCATG 1722 Score = 86.0 bits (94), Expect = 2e-12 Identities = 201/303 (66%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 32363 CCGTCTTTGATGCGGAATGCGGAGCGGGTGAAGTGCGCGGACTGCCTT---CCGTGGCGG 32419 ||||| ||| |||||| ||| ||||| ||| | ||||| | | | | | | | Sbjct 1051 CCGTCGGTGAAGCGGAACGCGCTGCGGGAGAACTCGGCGGAGCGGCGTGAACTCTTCCTG 992 Query 32420 CTCTTGAAACGCGGGTACTTCGCGAGGCCCTTGAAGAACGCGGCGAACGCCGAATGCTGA 32479 |||||||| || || ||| | | || |||||||| || ||| || ||||| Sbjct 991 CTCTTGAACCGGGGATACCCGGAGGTGCGGTTGAAGAAGCGGGTGAAGGCGTTCTGCTGG 932 Query 32480 TGCCGCAGCGTCTGTTGCAACGGAACCGACGACACCTCAGACAGGAACGCCAGATCCTCG 32539 |||||||| ||||| || | || || || || ||||| || |||| || ||||| Sbjct 931 TGCCGCAGTGTCTGCTGGAGGGGGACGGAGGAGACCTCCCGGAGAAACGAGAGGTCCTCC 872 Query 32540 GTCTTCTTCCACTCCGAGAGAGCAGCGTCGGTCTCCTTGTAGGAGGTCGATTTTTGTTCG 32599 ||||||| | | || || || ||| || ||||||||||||| || || Sbjct 871 TGTGTCTTCCAGGCGGTCAGCGCCGCCGAGGTGTCGGTGTAGGAGGTCGACTTCGACTCC 812 Query 32600 GTGGTGTAGCGCTGCTGCCGTTCGGCGAGCGTCTTGTTCCACACCAGACGTACGCAGCCG 32659 |||| ||| |||||| | | | || ||||||||| ||||| || ||||| ||| Sbjct 811 ACCGTGTGGCGGGTCTGCCGCAGGTCCAACGCCTTGTTCCAGACCAGTCGGACGCACCCG 752 Query 32660 AAC 32662 ||| Sbjct 751 AAC 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181119983054310