Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028682.1
Length=69030
Score E
Sequences producing significant alignments: (Bits) Value
seq963 149 3e-31
seq2825 136 2e-27
>seq963
Length=26998
Score = 149 bits (164), Expect = 3e-31
Identities = 186/257 (72%), Gaps = 2/257 (1%)
Strand=Plus/Plus
Query 40627 CGATTTCGCCGCCAAGGACGGCACACCGATCTACGC-TGCGCAGGGCGGCACCGTGGCCT 40685
||| ||||||||| |||||||| || ||||||| ||||| ||| ||||| || ||
Sbjct 21950 CGACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGG-GGCACAGTCCTCT 22008
Query 40686 ACATCGGCAGAGCCGACGGTTTCGGGCAATGGATCGTGATCGACCACCNNNNNNNNNNNN 40745
|||||||| ||| ||| | ||| || ||||| || |||||||||
Sbjct 22009 ACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCACCCGGACAGTGAGG 22068
Query 40746 NTGGCGGCACGACCGTCTACGGACACATGTGGGACGCGTTCGCCACCGGACTACGTCAAG 40805
|||||| ||||| ||||| || ||||||||||| | ||| || || || | || |
Sbjct 22069 GCGGCGGCGTGACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGCAGCAGG 22128
Query 40806 GGCAGCGCGTCGAGGCCGGGCAGCTCATCGCCTACGTCGGCACGAACGGTCAATCGACCG 40865
||||| | || || || || |||||||||| ||||||||| |||| ||||| ||||||
Sbjct 22129 GGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGGCGACCG 22188
Query 40866 GCCCACATCTGCACTTC 40882
|||| || || ||| ||
Sbjct 22189 GCCCGCACCTTCACCTC 22205
>seq2825
Length=19190
Score = 136 bits (150), Expect = 2e-27
Identities = 284/418 (68%), Gaps = 8/418 (2%)
Strand=Plus/Minus
Query 46131 GGTGGGCCGGGCCAGCACGACGCAGTCACACATCGGGAAATCGGCACCCTCGGTGAGCAC 46190
||| || || ||||||||||| |||||||| ||||| || || ||||||||||||||
Sbjct 6612 GGTAGGACGTGCCAGCACGACACAGTCACAGCGGGGGAAGTCCGCGCCCTCGGTGAGCAC 6553
Query 46191 CTGCACAGTGACCAGCGCCTTGGCGGTGCCGTTTCGGTACGCCTCGTATACGGGCTGGCG 46250
|||||||||||||| ||| | |||| | ||| || ||| | ||| ||
Sbjct 6552 CTGCACAGTGACCATGGCCCGGATTTCGCCGCTGCGGAACTGGCGGTAGATTTCCTGCCG 6493
Query 46251 CTCGGCGTAGCTCATCGAGCCGGTGACGGCGACGGCG-GGGAAATCGGCG-GCGGTCAGT 46308
||| || | ||| ||||| || |||| | | ||| | | ||| ||||| ||
Sbjct 6492 CTCCGCCTTGCTGTGGCTGCCGGACAC--CGACCGGGTGGGGTAGCCGCGCGCGGTGAGC 6435
Query 46309 GCGTCGGCGATGTGGTGGGCNNCGTCGACCGACGCGGCGAAGATGATCGGGCGGCGGTCG 46368
|| |||| | | | | | ||||| ||| ||||||||||||||||| |||||||
Sbjct 6434 TCGGCGGCCAGCTCCTCGCCCTGCTCGACGGACACGGCGAAGATGATCGGGACGCGGTCG 6375
Query 46369 GCGGCGTGCAGCTTGATCGCGTCGACCACGTACTCGG--TGGCGGCTTCCATGACCTCGG 46426
|||||||| | | |||||||| || |||| | | ||| ||||||||||
Sbjct 6374 GCGGCGTGGCGGAGCACGGCGTCGAC--GGTGGTCGGGATCGAGGCACGCATGACCTCGT 6317
Query 46427 CGAGGTCGGACTGCTGGAAATCACCGGCGACGGTGCGCACGTCATCGAGGGCGTTGAGGT 46486
| ||||||||||| | | | || ||| |||| || | ||||| ||| ||||
Sbjct 6316 CCAGGTCGGACTGTTTGTAGTCTCCGCCGACCGTCTTGATCCGGGCGAGGAGGTTCAGGT 6257
Query 46487 TATTGATGCGGACGGTCAGACCGCGCGGGCGCACGAGGTAGCCAGAGTCGATGGCCCA 46544
| | || |||||||| ||||| || | |||||| | || |||||| |||||
Sbjct 6256 GCTCGGTGACCACGGTCAGCCCGCGGGGCGGGACGAGGAACCCGTTGTCGATCGCCCA 6199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 220647147627855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |