Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028778.1 Length=75626 Score E Sequences producing significant alignments: (Bits) Value SEQ43844 105 3e-18 >SEQ43844 Length=619 Score = 105 bits (116), Expect = 3e-18 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 55500 GTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGGCGAAACC 55559 || || || || ||||||| ||||||||||||||| ||| |||||||||| | |||| | Sbjct 88 GTCGCATCCACCCCCCGCACGTTCAACAAGCAGACCAACCAGTGGGAGGATGCCGAAGCA 147 Query 55560 GTGTTCCTC-CGTACGTCGGTGTGGCGCGAGCTTGCAGAGGGCGCGGCTGAGAACCTGCG 55618 |||||||| | | | | |||||||| || || ||| || ||| | | ||||| Sbjct 148 CTGTTCCTCACCTTCAAC-CTGTGGCGCCAGGCAGCGGAGAACGTGGCGAACAGCCTGCA 206 Query 55619 TAAGGGTGACAACGTTGTCGTGATCGGCAACCTCAAGCAGCGCGCTTACGA---GAAGGA 55675 ||||||||| || |||| ||||||| ||| ||||| | ||||| |||| Sbjct 207 CAAGGGTGACCGGGTGATCGTCGTCGGCAATCTCCGCCAGCGGTCCTACGAGTCGAAGAC 266 Query 55676 CGGCCAGACTCGCACCGTCTTTGAGATTGACGGCG 55710 |||| | || |||||||| | ||||| || |||| Sbjct 267 CGGCGACACGCGCACCGTGTACGAGATCGA-GGCG 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241742487393235