Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028792.1
Length=56826
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19605 86.0 2e-12
>SEQ19605
Length=8275
Score = 86.0 bits (94), Expect = 2e-12
Identities = 135/189 (71%), Gaps = 11/189 (6%)
Strand=Plus/Minus
Query 12827 TTGAC-TACTCCCCGCCCTGAAGGACGGGGATTCTCGCAGTCGCCTGCGAGGGTTCCTGT 12885
||||| | ||||||||||| | | ||||||||| || || | || || ||||||
Sbjct 1907 TTGACCTCCTCCCCGCCCTCACAGGCGGGGATTCCCGGCTTCACAGCCGGGGCTTCCTGC 1848
Query 12886 TTCACAGGCGACTGCC-GATG---GGATGCCC---CATGCGGTCTGACGTCGCCTCCGCA 12938
||| | |||| ||| | || |||| ||| || ||||| ||| |||| ||
Sbjct 1847 TTCGACGCCGACCGCCTGGTGTCCGGATTCCCGGTCACCTGGTCTTCTGTCAGCTCCACA 1788
Query 12939 GGCGTTTTGTGTCTCCGCCAGCCCGGCGGCGACAAGGATGTTCTTCGCGGCGTTGATGTC 12998
||||||| ||||||| ||||| |||||| |||||||| | |||||||||| |||
Sbjct 1787 GGCGTTTCACCTCTCCGCGAGCCCCGCGGCG---AGGATGTTTCTGGCGGCGTTGACGTC 1731
Query 12999 CCGATCATG 13007
||| |||||
Sbjct 1730 CCGGTCATG 1722
Score = 80.6 bits (88), Expect = 1e-10
Identities = 200/303 (66%), Gaps = 3/303 (1%)
Strand=Plus/Minus
Query 13687 CCGTCTTTGATGCGGAATGCGGAGCGGGTGAAGTGCGCGGACTGCCTT---CCGTGGCGG 13743
||||| ||| |||||| ||| ||||| ||| | ||||| | | | | | | |
Sbjct 1051 CCGTCGGTGAAGCGGAACGCGCTGCGGGAGAACTCGGCGGAGCGGCGTGAACTCTTCCTG 992
Query 13744 CTCTTGAAACGCGGGTACTTCGCGAGGCCCTTGAAGAACGCGGCGAACGCCGAATGCTGA 13803
|||||||| || || ||| | | || |||||||| || ||| || |||||
Sbjct 991 CTCTTGAACCGGGGATACCCGGAGGTGCGGTTGAAGAAGCGGGTGAAGGCGTTCTGCTGG 932
Query 13804 TGCCGCAGCGTCTGTTGCAACGGAACCGACGACACCTCAGACAGGAACGCCAGATCCTCG 13863
|||||||| ||||| || | || || || || ||||| || |||| || |||||
Sbjct 931 TGCCGCAGTGTCTGCTGGAGGGGGACGGAGGAGACCTCCCGGAGAAACGAGAGGTCCTCC 872
Query 13864 GTCTTCTTCCACTCCGAGAGAGCAGCGTCAGTCTCCTTGTAGGAGGTCGATTTTTGTTCG 13923
||||||| | | || || || || || ||||||||||||| || ||
Sbjct 871 TGTGTCTTCCAGGCGGTCAGCGCCGCCGAGGTGTCGGTGTAGGAGGTCGACTTCGACTCC 812
Query 13924 GTGGTGTAGCGCTGCTGCCGTTCGGCGAGCGTCTTGTTCCACACCAGACGTACGCAGCCG 13983
|||| ||| |||||| | | | || ||||||||| ||||| || ||||| |||
Sbjct 811 ACCGTGTGGCGGGTCTGCCGCAGGTCCAACGCCTTGTTCCAGACCAGTCGGACGCACCCG 752
Query 13984 AAC 13986
|||
Sbjct 751 AAC 749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181622107991880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |