Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028792.1 Length=56826 Score E Sequences producing significant alignments: (Bits) Value SEQ19605 86.0 2e-12 >SEQ19605 Length=8275 Score = 86.0 bits (94), Expect = 2e-12 Identities = 135/189 (71%), Gaps = 11/189 (6%) Strand=Plus/Minus Query 12827 TTGAC-TACTCCCCGCCCTGAAGGACGGGGATTCTCGCAGTCGCCTGCGAGGGTTCCTGT 12885 ||||| | ||||||||||| | | ||||||||| || || | || || |||||| Sbjct 1907 TTGACCTCCTCCCCGCCCTCACAGGCGGGGATTCCCGGCTTCACAGCCGGGGCTTCCTGC 1848 Query 12886 TTCACAGGCGACTGCC-GATG---GGATGCCC---CATGCGGTCTGACGTCGCCTCCGCA 12938 ||| | |||| ||| | || |||| ||| || ||||| ||| |||| || Sbjct 1847 TTCGACGCCGACCGCCTGGTGTCCGGATTCCCGGTCACCTGGTCTTCTGTCAGCTCCACA 1788 Query 12939 GGCGTTTTGTGTCTCCGCCAGCCCGGCGGCGACAAGGATGTTCTTCGCGGCGTTGATGTC 12998 ||||||| ||||||| ||||| |||||| |||||||| | |||||||||| ||| Sbjct 1787 GGCGTTTCACCTCTCCGCGAGCCCCGCGGCG---AGGATGTTTCTGGCGGCGTTGACGTC 1731 Query 12999 CCGATCATG 13007 ||| ||||| Sbjct 1730 CCGGTCATG 1722 Score = 80.6 bits (88), Expect = 1e-10 Identities = 200/303 (66%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 13687 CCGTCTTTGATGCGGAATGCGGAGCGGGTGAAGTGCGCGGACTGCCTT---CCGTGGCGG 13743 ||||| ||| |||||| ||| ||||| ||| | ||||| | | | | | | | Sbjct 1051 CCGTCGGTGAAGCGGAACGCGCTGCGGGAGAACTCGGCGGAGCGGCGTGAACTCTTCCTG 992 Query 13744 CTCTTGAAACGCGGGTACTTCGCGAGGCCCTTGAAGAACGCGGCGAACGCCGAATGCTGA 13803 |||||||| || || ||| | | || |||||||| || ||| || ||||| Sbjct 991 CTCTTGAACCGGGGATACCCGGAGGTGCGGTTGAAGAAGCGGGTGAAGGCGTTCTGCTGG 932 Query 13804 TGCCGCAGCGTCTGTTGCAACGGAACCGACGACACCTCAGACAGGAACGCCAGATCCTCG 13863 |||||||| ||||| || | || || || || ||||| || |||| || ||||| Sbjct 931 TGCCGCAGTGTCTGCTGGAGGGGGACGGAGGAGACCTCCCGGAGAAACGAGAGGTCCTCC 872 Query 13864 GTCTTCTTCCACTCCGAGAGAGCAGCGTCAGTCTCCTTGTAGGAGGTCGATTTTTGTTCG 13923 ||||||| | | || || || || || ||||||||||||| || || Sbjct 871 TGTGTCTTCCAGGCGGTCAGCGCCGCCGAGGTGTCGGTGTAGGAGGTCGACTTCGACTCC 812 Query 13924 GTGGTGTAGCGCTGCTGCCGTTCGGCGAGCGTCTTGTTCCACACCAGACGTACGCAGCCG 13983 |||| ||| |||||| | | | || ||||||||| ||||| || ||||| ||| Sbjct 811 ACCGTGTGGCGGGTCTGCCGCAGGTCCAACGCCTTGTTCCAGACCAGTCGGACGCACCCG 752 Query 13984 AAC 13986 ||| Sbjct 751 AAC 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181622107991880