Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028798.1
Length=50882
Score E
Sequences producing significant alignments: (Bits) Value
SEQ25496 84.2 7e-12
SEQ24884 84.2 7e-12
>SEQ25496
Length=2929
Score = 84.2 bits (92), Expect = 7e-12
Identities = 67/78 (86%), Gaps = 2/78 (3%)
Strand=Plus/Plus
Query 3962 CGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTCGAGTCCTG 4021
||| |||||||||| ||||||||||||||||||| |||| || ||||||||| |||||||
Sbjct 403 CGTGGCTCAATTGG-CAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 461
Query 4022 CCGTGTCTGCAACCACCC 4039
|| |||||| |||||
Sbjct 462 TCGCCCCTGCAA-CACCC 478
>SEQ24884
Length=1939
Score = 84.2 bits (92), Expect = 7e-12
Identities = 209/304 (69%), Gaps = 20/304 (7%)
Strand=Plus/Minus
Query 4677 AACGACCCGCCC-ACGCAGGCCCAGAAGGACCGGCTGTGGGAGCACATCGTCCGCTCCAT 4735
|||||||||||| ||| | | | |||| || | | ||||| || ||||||| |||||
Sbjct 747 AACGACCCGCCCCACG-ACGACGAGAAAGAGCAGTTGTGGTCGCGCATCGTCGCGTCCAT 689
Query 4736 CAACGCGGGCTACGGCGTCGTCATGAAC---TGGGTCGCCCCGCCGTCGAACAAGCCACG 4792
||||| ||| || || | |||| |||||| |||||| ||| | || ||
Sbjct 688 CAACGGCGGCGTAGGGGTGGCGGCGAACATCTGGGTC---CCGCCGGAAAACTACCCGCG 632
Query 4793 CGGTGTGA-AGGGCTC---GGTCAGCCCGCGCTACAGCGGCGGCACCA-CATACCACTAC 4847
|| || | ||| || | || || |||| |||| || | ||| | |||||
Sbjct 631 -GGCGTCCTACACCTCCACGGAGAACCTGCACTACGGCGGTGGATTCGTCATGC-ACTAC 574
Query 4848 GTCGCGTGCATGGGCTACGAC---GACACCCCCGGCGCTCGGGCA-GTGTGGATCGCCGA 4903
||||| |||||| |||| | |||||| ||| | || | || || ||| | |||||
Sbjct 573 CTCGCGGTCATGGGGTACGCCCGCGACACCGGCGGTG-TCCGCCACGTCTGGCTGGCCGA 515
Query 4904 CAGCGGCTTCCAGCCGCAGGGCTACTGGATCTCGTTTGACCAGTGCGCCACGCTGATCCC 4963
|||||| ||| | ||||| |||| ||| | |||| ||||||| |||||| |||||||
Sbjct 514 CAGCGGGTTCGACCCGCACGGCTCGTGGGTGACGTTCGACCAGTTCGCCACCATGATCCC 455
Query 4964 GCCG 4967
|||
Sbjct 454 CCCG 451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162611721820440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |