Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028801.1 Length=68346 Score E Sequences producing significant alignments: (Bits) Value seq963 163 1e-35 >seq963 Length=26998 Score = 163 bits (180), Expect = 1e-35 Identities = 194/258 (75%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 40176 CGATTTCGCCGCCAAGGACGGCACACCGATCTACGC-TGCGCAGGGCGGCACCGTGGCCT 40234 ||| ||||||||| |||||||| || ||||||| ||||| ||| ||||| || || Sbjct 21950 CGACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGG-GGCACAGTCCTCT 22008 Query 40235 ACATCGGCAGAGCCGACGGTTTTGGGCAATGGATCGTGATCGACCACCCCG-CAGCCGAC 40293 |||||||| ||| ||| | || || ||||| || |||||||||| | ||| || Sbjct 22009 ACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCACCCGGACAGT-GAG 22067 Query 40294 GGTGGCGGCACGACCGTCTACGGACACATGTGGGACGCGTTCGCCACCGGACTACGTCAA 40353 || |||||| ||||| ||||| || ||||||||||| | ||| || || || | || Sbjct 22068 GGCGGCGGCGTGACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGCAGCAG 22127 Query 40354 GGGCAGCGCGTCGAGGCCGGGCAGCTCATCGCCTACGTCGGCACGAACGGTCAATCGACC 40413 |||||| | || || || || |||||||||| ||||||||| |||| ||||| ||||| Sbjct 22128 GGGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGGCGACC 22187 Query 40414 GGCCCACATCTGCACTTC 40431 ||||| || || ||| || Sbjct 22188 GGCCCGCACCTTCACCTC 22205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 218459577524835