Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028803.1 Length=69118 Score E Sequences producing significant alignments: (Bits) Value seq963 149 3e-31 seq2825 132 2e-26 >seq963 Length=26998 Score = 149 bits (164), Expect = 3e-31 Identities = 186/257 (72%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 40650 CGATTTCGCCGCCAAGGACGGCACACCGATCTACGC-TGCGCAGGGCGGCACCGTGGCCT 40708 ||| ||||||||| |||||||| || ||||||| ||||| ||| ||||| || || Sbjct 21950 CGACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGG-GGCACAGTCCTCT 22008 Query 40709 ACATCGGCAGAGCCGACGGTTTCGGGCAATGGATCGTGATCGACCACCNNNNNNNNNNNN 40768 |||||||| ||| ||| | ||| || ||||| || ||||||||| Sbjct 22009 ACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCACCCGGACAGTGAGG 22068 Query 40769 NTGGCGGCACGACCGTCTACGGACACATGTGGGACGCGTTCGCCACCGGACTACGTCAAG 40828 |||||| ||||| ||||| || ||||||||||| | ||| || || || | || | Sbjct 22069 GCGGCGGCGTGACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGCAGCAGG 22128 Query 40829 GGCAGCGCGTCGAGGCCGGGCAGCTCATCGCCTACGTCGGCACGAACGGTCAATCGACCG 40888 ||||| | || || || || |||||||||| ||||||||| |||| ||||| |||||| Sbjct 22129 GGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGGCGACCG 22188 Query 40889 GCCCACATCTGCACTTC 40905 |||| || || ||| || Sbjct 22189 GCCCGCACCTTCACCTC 22205 >seq2825 Length=19190 Score = 132 bits (146), Expect = 2e-26 Identities = 277/408 (68%), Gaps = 8/408 (2%) Strand=Plus/Minus Query 46164 GCCAGCACGACGCAGTCACACATCGGGAAATCGGCACCCTCGGTGAGCACCTGCACAGTG 46223 ||||||||||| |||||||| ||||| || || |||||||||||||||||||||||| Sbjct 6602 GCCAGCACGACACAGTCACAGCGGGGGAAGTCCGCGCCCTCGGTGAGCACCTGCACAGTG 6543 Query 46224 ACCAGCGCCTTGGCGGTGCCGTTTCGGTACGCCTCGTATACGGGCTGGCGCTCGGCGTAG 46283 |||| ||| | |||| | ||| || ||| | ||| ||||| || | | Sbjct 6542 ACCATGGCCCGGATTTCGCCGCTGCGGAACTGGCGGTAGATTTCCTGCCGCTCCGCCTTG 6483 Query 46284 CTCATCGAGCCGGTGACGGCGACGGCG-GGGAAATCGGCG-GCGGTCAGTGCGTCGGCGA 46341 || ||||| || |||| | | ||| | | ||| ||||| || || |||| | Sbjct 6482 CTGTGGCTGCCGGACAC--CGACCGGGTGGGGTAGCCGCGCGCGGTGAGCTCGGCGGCCA 6425 Query 46342 TGTGGTGGGCNNCGTCGACCGACGCGGCGAAGATGATCGGGCGGCGGTCGGCGGCGTGCA 46401 | | | | ||||| ||| ||||||||||||||||| ||||||||||||||| Sbjct 6424 GCTCCTCGCCCTGCTCGACGGACACGGCGAAGATGATCGGGACGCGGTCGGCGGCGTGGC 6365 Query 46402 GCTTGATCGCGTCGACCACGTACTCGG--TGGCGGCTTCCATGACCTCGGCGAGGTCGGA 46459 | | |||||||| || |||| | | ||| |||||||||| | |||||||| Sbjct 6364 GGAGCACGGCGTCGAC--GGTGGTCGGGATCGAGGCACGCATGACCTCGTCCAGGTCGGA 6307 Query 46460 CTGCTGGAAATCACCGGCGACGGTGCGCACGTCATCGAGGGCGTTGAGGTTATTGATGCG 46519 ||| | | | || ||| |||| || | ||||| ||| |||| | | || Sbjct 6306 CTGTTTGTAGTCTCCGCCGACCGTCTTGATCCGGGCGAGGAGGTTCAGGTGCTCGGTGAC 6247 Query 46520 GACGGTCAGACCGCGCGGGCGCACGAGGTAGCCAGAGTCGATGGCCCA 46567 |||||||| ||||| || | |||||| | || |||||| ||||| Sbjct 6246 CACGGTCAGCCCGCGGGGCGGGACGAGGAACCCGTTGTCGATCGCCCA 6199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 220928589395495