Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028813.1 Length=57766 Score E Sequences producing significant alignments: (Bits) Value SEQ18518 98.7 4e-16 >SEQ18518 Length=6842 Score = 98.7 bits (108), Expect = 4e-16 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 39791 AGCACGCGTGGCGTGACCAAGCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCG 39850 |||| | |||| || || ||| ||||| ||||| |||||| ||| ||||||||| | Sbjct 320 AGCAGGACTGGCAGGAGCAGGCGCTGTGCGCCCAGACCGATCCGGAGGCGTTCTTCCCGG 379 Query 39851 AAAAGGGAGGAA--ACGCGAAACCCGCAAAGCGGATCTGCGGTATGTGCGACGTCCGGGA 39908 | ||||| ||| || || | || |||||||||||| | |||| ||||| || Sbjct 380 AGAAGGGCGGATCGACCCGGGAGGCG--AAGCGGATCTGCCGCGCATGCGGGGTCCGCGA 437 Query 39909 CGAATGCCTTCAGTGGGCGCTGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTC 39968 ||| ||||| ||| || || || || | || | |||||| |||| ||||| ||||| Sbjct 438 CGAGTGCCTCGAGTACGCACTCGAGCACGATGAGCGGTTCGGGATCTGGGGCGGACTGTC 497 Query 39969 CGAGCGTGAACGCCG 39983 |||||| || || || Sbjct 498 CGAGCGCGAGCGTCG 512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184628461121280