Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32872 643 4e-180
SEQ43235 161 3e-35
>SEQ32872
Length=2637
Score = 643 bits (712), Expect = 4e-180
Identities = 1214/1755 (69%), Gaps = 43/1755 (2%)
Strand=Plus/Minus
Query 37593 GCCCTTGCG--GGTGGCACCCGTGGAGTCGAACGCACCGGCCTTGATCAAGGACTCGACG 37650
||||||||| |||||| | ||||||||| || ||||||||||||| || ||| |
Sbjct 1826 GCCCTTGCGCGGGTGGC--CGAGGGAGTCGAAGGCGCCGGCCTTGATCAGTGAGTCGGTG 1769
Query 37651 GCTCGCTTGCT-CACGTTCGCCTGAGTCG--CCGACCGAAGGAAGTCCGGCAGGGAGGTG 37707
| |||||| | || | || | |||| | ||| || |||| | | | |||
Sbjct 1768 ACGCGCTTGTTGCAGG--CGGTGGCGTCGATCTTGTCGA-GGTAGTCGGAGAAGTCCGTG 1712
Query 37708 AACTTCCCCCAGGCTTCCCGCAGTTGGACGATCTCATCGACCATGCCCTCGCCCACGTTC 37767
||||||||| | || ||| || |||| ||||| | | ||||||| |||||
Sbjct 1711 AACTTCCCCTTCTCCTCGCGCGCCGCGATGATCGAGTCGACGACGTCCTCGCCGACGTTG 1652
Query 37768 TTCACGGCGGTCAGCCCGAAGCGGATCTCCCGCTCCCCGTTCGGGGTG-AAGGAGGAGTT 37826
|| ||| || ||||||||||| ||| || ||| ||| || |||| | ||
Sbjct 1651 CGGACCGCGCCGAGGCCGAAGCGGATGTCC---TCGCCGA-CGGACTGGAAGGTGTAGGC 1596
Query 37827 CGAGACCGACACGTC-GGGCGGCAGGACCCGAAGGCCCATGCGCCTGCACTCGCCGAGGT 37885
|| | ||||| |||| | || || || | || | | | | ||| ||| ||||||
Sbjct 1595 GGACTCGTTGACGTCCGGGCTG-AGCACGCGCACCCCGAGGTGGCGGCAGTCGGCGAGGT 1537
Query 37886 ACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGCCATGTACTCGG 37945
| | || ||||| ||| | ||| ||||||||||||||| ||||||||||||||||
Sbjct 1536 AGATCGCGGACTTGTCCTTCTTGTCCGCCACCGAGGTGAGCAGCGCCGCCATGTACTCGG 1477
Query 37946 CCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGT 38005
| | ||| ||| ||| ||||| || || | | || | || ||||| | || | ||
Sbjct 1476 CGGTGTAATGCTCCTTGAGGTAGGCGGTCCAGAAGCTCACCAGACCGTAGCCGGCGGCGT 1417
Query 38006 GCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCCGGATGG 38065
||| |||||||| ||||| |||||||| || | | | |||||||| ||| ||| ||
Sbjct 1416 GCGACTTGTTGAGCGCGTAGCCGGCGAACGGCAGCACCGTGTCCCACAGGGCCTGGACGG 1357
Query 38066 CAGCCTCCGAGTAGCCTCGCTCG-CTCGCCCCCTTCTG-GAAGTTCACGAACTCCTTGGC 38123
| | || |||||||| | | | || || | | ||| || |||||||||||||
Sbjct 1356 CCTCGTCGGAGTAGCC--GTTGGACTTCATGCCGGCGGCGAACTTGTCGAACTCCTTGGC 1299
Query 38124 CAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGGT 38183
|||||||||||||||||||||||||||||| |||| |||||||| |||| |||
Sbjct 1298 CAGCACCTCGGGCTTCTTCTTGCCCATGGCCTTGCGGAACCCGTCGGCCTCACCGGCGGT 1239
Query 38184 GTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAA 38243
||| || | |||||| | || | |||||||||||| | |||||| ||| |
Sbjct 1238 GTAGTTCGCGACCTTCTGCGAGATCCTCATGATCTGCTCCTGGTACACGATGAGACCGTA 1179
Query 38244 GGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCTC 38303
|||| |||||||| || | | ||| | | ||| |||||||||||| ||||
Sbjct 1178 GGTCTCCTCCAGGATGTCCTTGATGGACTCGGCGAGCTCCGGGTGGATCGGCTCGATCGG 1119
Query 38304 CTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCATGCCCATCGGACCCGG 38363
|| | |||||||||||| ||||||| | ||||| || | |||||||| |||||
Sbjct 1118 CTTGCGGCCGTTCTTGCGGTCCGCGTAGTCCCAGTGCGCCCCGACACCCATCGGGCCCGG 1059
Query 38364 ACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAA-CTGGTCCGGCTTCAGCAGGCGAA 38422
||||||||||| | | ||| ||||| | ||| | ||| ||||||| | |
Sbjct 1058 CCGGTACAGCGCCAGGGACGCCACAATGTCGTTGAAGCCGGTG-GGCTTCATGCGCTTGA 1000
Query 38423 GCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGGGTGTCGCCCCTGGCCA 38482
|||| |||| ||||| ||| |||||||||| ||| ||||| || | |||||
Sbjct 999 GCAGTTCCTGCATGCCGCCGGAGTCCAGCTGGAAGATGCCGAGCGTGTCACCGCGGGCCA 940
Query 38483 GCAGCTCGTAGGTTGCCGGGTCGTCCAGCGGGATGTTCTCGATGTCGACGTGCTCACCAC 38542
|||| || |||| ||||||||||| || | |||||| | ||||| || ||| || |
Sbjct 939 GCAGTTCATAGGACGCCGGGTCGTCGGTCGACAGGTTCTCCAGGTCGAAGTCCTCGCCCC 880
Query 38543 GGTTGCGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGA 38602
|||| ||||||||| | |||| | |||| |||||||| || ||||| ||||
Sbjct 879 GGTTCTTCTTGATGTTCTCCAGGCAGTCGGCGATGACGGTGAGGTTGCGCAGCCCCAGGA 820
Query 38603 AGTCCATCTTCAGCAGGCCCAGGGCCTCGCAGCTCGGGTAGT-CGAACTGCGTGATCGTC 38661
||||||||||||||||||| | |||||| ||| ||||||| | | | | ||||||
Sbjct 819 AGTCCATCTTCAGCAGGCCGATGGCCTCACAGGCCGGGTAGGGCCAGCCG-GTGATCAGG 761
Query 38662 ACGCCGTCCGCAGGCCGCACCCACGTAGGGATGTGGTCGACCAGCGGCTCGTCAGACATG 38721
||||||| || ||| |||| | ||||||||||||| ||||||| | | ||||
Sbjct 760 GCGCCGTCGTTGGGGCGCTTCCACATCGGGATGTGGTCGAGCAGCGGCACCGAGGCCATG 701
Query 38722 ATCACACCGGCTGCGTGCACGCCCATCTGCCGGACGAGTCCTTCGAGGCCACGCGCGAGG 38781
||||| || ||||| |||| ||| ||||| | || || ||||| | ||| |
Sbjct 700 ATCACTGCGCAGGCGTGGCCGCCGGCCTGGCGGACCACGCCCTCCAGGCCGAGGGCGTCG 641
Query 38782 TCGATGACCTCCTTCGCGTCCTTGTCGTTCTCGTACAGCGCCCGGATCTCGCCCGCCTCG 38841
||| || |||||| | || ||| ||||| || | |||||||| | ||| ||
Sbjct 640 TCGTAGATCTCCTTGACCACCGGATCGGTCTCGATGAGGGTGCGGATCTCCGCGGCCGCG 581
Query 38842 TCGTAGCGCGGGTGCTCCGGGTTGGTGATGCCCTCCAGGGGCATCGAC-GCGCCCATCAC 38900
||||||||||||||||||| | ||||||| ||| || || | |||| |
Sbjct 580 CCGTAGCGCGGGTGCTCCGGATCCATGATGCCGGACAGCGGGATGTCCTTCGCCGCCTGC 521
Query 38901 GTCGGCCGGGTA-CGCCTTGGTCAGCTTCTCGCCGACCTGGAA---GGGCT---TGTCCA 38953
| ||| ||| | |||||||| | | ||| ||| |||||| ||||| ||
Sbjct 520 GCCGG--GGGCAGGGCCTTGGTGATCCGGTCGGCGATCTGGAAGCCGGGCTGGCCGTGGT 463
Query 38954 GCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGT-CCGTACGTCGCGATC 39012
| ||||||| |||||||| ||||| | | ||| | |||| ||| | || || |
Sbjct 462 GGGCGCGGGCGGCGTCCTTGATCGCCTGCTTGGTCTTCA-CCGTGCCGAAGGTGATGACC 404
Query 39013 TGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGA 39072
|| ||||||||||| ||| | |||| || | |||| ||||||| ||| | ||
Sbjct 403 TGGGCGACCTTGTCCTCGCCCCAGTTCTGGGCGGCGTAGCGGATCATCTCGGAA---CGC 347
Query 39073 CGGTCAT---CGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAAC 39129
||||||| ||||||||||||| | ||||| |||| || || ||||| |||||
Sbjct 346 CGGTCATCGGCGAAGTCGATGTCGATATCGGGGGCGGAGGGGCGTTCCGGGTTGAGGAAT 287
Query 39130 CGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCG 39189
|||||||| || |||||||| ||||||||| | || ||||||| || ||||| |||
Sbjct 286 CGCTCGAACATCAGCCCGTGCTCGATGGGGTCGATGTTGGTGATCGTCAGTGCGTAGGCG 227
Query 39190 GCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCC 39249
|||| | ||| || || ||||| || || |||||||| | | |||| | ||
Sbjct 226 ACCAGGGCGCCGGCGGCGGAGCCACGGCCCGGGCCGACGGAGATGCCGATGGAGCGGGCG 167
Query 39250 CAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATG 39309
||||| ||||||||||||||||||||| |||||| | ||| || || ||| |
Sbjct 166 TGCTTGATGAGGTCGGCGACGACGAGGAAGTAGGACGGGTAGCCCTTCATGTCGATGACA 107
Query 39310 TCGATCTCGTACTCG 39324
|||||||||||||
Sbjct 106 CTGATCTCGTACTCG 92
>SEQ43235
Length=559
Score = 161 bits (178), Expect = 3e-35
Identities = 182/244 (75%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 39680 AGTCGTTGGTGACCACCGGGGTGAGACCGAGGCGCTGACCGAGGCGGTAGAGGTCGTCGC 39739
||||||||||||||| ||| | ||| ||||||| | |||| | ||||||||| |
Sbjct 6 AGTCGTTGGTGACCAGCGGCGGGAGGGCGAGGCGGCGTCCGATCTCGAGGAGGTCGTCCC 65
Query 39740 GGACGCGCCGCTCGATCTCCAGGCCGTGGTCCATGATCTCCAGGAAGAAGTTGTCCTTCC 39799
|||| ||| |||||| ||||||||||||||||| ||| |||||| ||||||| |
Sbjct 66 GGACCCGCTTCTCGATGGACAGGCCGTGGTCCATGAGCTCGAGGAAGTAGTTGTCGCGGC 125
Query 39800 CGAAGATCTCCCGCCACTTCGCGGCCTCGGCGACGGCCTCCTCGTACTGGCCGAGGTTGA 39859
|| |||| ||| |||| ||||| || | ||| ||||| | | |||||||||| |
Sbjct 126 CGTAGATGTCCTGCCATTTCGCCGCGGCCTCGAGCGCCTCGTTGAACTGGCCGAGCCGCA 185
Query 39860 GCCGGGTCATCACTGCGCCACCGGGGCATCCCGTGGTGCCGATCAGGCCCTCTGCGTGCT 39919
|||||||| ||| |||| |||||| || |||||| |||| ||| || |||||||
Sbjct 186 GCCGGGTCTGCACCTCGCCGGAGGGGCAGCCGGTGGTGGCGATGCTGCCGTCGGCGTGCT 245
Query 39920 CCGC 39923
| ||
Sbjct 246 CGGC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159627756427110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |