Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_028942.1 Length=68293 Score E Sequences producing significant alignments: (Bits) Value seq963 149 3e-31 >seq963 Length=26998 Score = 149 bits (164), Expect = 3e-31 Identities = 186/257 (72%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 40454 CGATTTCGCCGCCAAGGACGGCACACCGATCTACGC-TGCGCAGGGCGGCACCGTGGCCT 40512 ||| ||||||||| |||||||| || ||||||| ||||| ||| ||||| || || Sbjct 21950 CGACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCCTGCGCCGGG-GGCACAGTCCTCT 22008 Query 40513 ACATCGGCAGAGCCGACGGTTTCGGGCAATGGATCGTGATCGACCACCNNNNNNNNNNNN 40572 |||||||| ||| ||| | ||| || ||||| || ||||||||| Sbjct 22009 ACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCACCCGGACAGTGAGG 22068 Query 40573 NTGGCGGCACGACCGTCTACGGACACATGTGGGACGCGTTCGCCACCGGACTACGTCAAG 40632 |||||| ||||| ||||| || ||||||||||| | ||| || || || | || | Sbjct 22069 GCGGCGGCGTGACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGCAGCAGG 22128 Query 40633 GGCAGCGCGTCGAGGCCGGGCAGCTCATCGCCTACGTCGGCACGAACGGTCAATCGACCG 40692 ||||| | || || || || |||||||||| ||||||||| |||| ||||| |||||| Sbjct 22129 GGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGGCGACCG 22188 Query 40693 GCCCACATCTGCACTTC 40709 |||| || || ||| || Sbjct 22189 GCCCGCACCTTCACCTC 22205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 218290072823870