Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028953.1
Length=110764
Score E
Sequences producing significant alignments: (Bits) Value
SEQ36884 223 2e-53
>SEQ36884
Length=2041
Score = 223 bits (246), Expect = 2e-53
Identities = 265/357 (74%), Gaps = 3/357 (1%)
Strand=Plus/Plus
Query 97169 ACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCGC 97228
||| |||||| | ||| |||||| ||||| |||||||| | || | | |
Sbjct 358 ACCACCGCCTGGACCTCCTCGTCGGTGACGAAGGCGCCCTGGAGGCGCTTCGGCTTGTTC 417
Query 97229 GCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCG 97288
|||||| || | ||| | ||||| ||||| || ||||||| |||||| ||||||| |
Sbjct 418 GCCCCCTGCGGGATGAACAGGCCGTCGCCCATACCGATGAGCTTCTCGGCGCCGCCCTGG 477
Query 97289 TCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACG 97348
|| ||||| || ||| || || || || | || ||||||| |||| |||||||||
Sbjct 478 TCGAGGATGACGCGGGAGTCCGTCAGCGAGGACGTCGCGAACGCCAGCCGGGACGGCACG 537
Query 97349 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 97408
|||| ||||| || || ||||| || |||||||| || |||||||||||||| || ||
Sbjct 538 TTGGTCTTGATCAGACCGGTGACGACGTCCACGGACGGACGCTGCGTCGCCAGCACCAGG 597
Query 97409 TGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 97468
|| ||||| || ||||| |||||||||| ||| ||||| ||| | |||||| || | |
Sbjct 598 TGGATACCCGCGGCGCGGGCCTTCTGGGTGATCCGGACGATGGCGTCCTCGA--TC-TCC 654
Query 97469 TTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97525
|| | || |||||||||||| ||||| |||||||| || ||||||||| |||
Sbjct 655 TTCGGGGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGACGCACACGATGTACGGG 711
Score = 165 bits (182), Expect = 6e-36
Identities = 202/276 (73%), Gaps = 0/276 (0%)
Strand=Plus/Plus
Query 97543 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCCACGGTGAGCCA 97602
||||||||||| ||| || ||| | | |||||| | ||||||||| || |||||
Sbjct 789 GTGGCGCACGCGGGCGGACTTCATGTCCATGTACCGCTGCTCCATCTCCTCGACCAGCCA 848
Query 97603 CCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGAT 97662
||||| | | |||||| | |||| |||| | |||| | ||||| |||||
Sbjct 849 GGTCAGCGCCGTCGCCGCCTTCTTCGGCTGCGTGATGATCGGCGTGATGAGGTGCGGGAT 908
Query 97663 ACCGTTGTACGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGTTTGACCCGATC 97722
|| | ||| ||||| || ||||||||||||||||||| | |||||| |||| ||
Sbjct 909 CCCCTCGTAGGGGGTCAGCTCCACCATCTTCGGGTCGACGAGGATGAGGCGGACCTCCTC 968
Query 97723 AGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTACCTGA 97782
|| | || ||| ||| ||||| || |||| |||||||| |||| |||||||| ||
Sbjct 969 CGGGGTCGCCCGGGTGAGGATGGACACGAGCAACGAGTTGACGAAGGCCGACTTACCGGA 1028
Query 97783 TCCGGTGGCGCCAGCCACCAGCAGGTGCGGCATTTT 97818
||||||| ||| || ||||||||||||||||| ||
Sbjct 1029 GCCGGTGGAGCCGGCGACCAGCAGGTGCGGCATCTT 1064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354120905931125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |