Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_028976.1
Length=50113
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32872 654 0.0
SEQ43235 156 1e-33
>SEQ32872
Length=2637
Score = 654 bits (724), Expect = 0.0
Identities = 1215/1758 (69%), Gaps = 49/1758 (3%)
Strand=Plus/Minus
Query 38026 GCCCTTGCG--GGTGGCACCCGTGGAGTCGAACGCACCGGCCTTGATCAAGGACTCGACG 38083
||||||||| |||||| | ||||||||| || ||||||||||||| || ||| |
Sbjct 1826 GCCCTTGCGCGGGTGGC--CGAGGGAGTCGAAGGCGCCGGCCTTGATCAGTGAGTCGGTG 1769
Query 38084 GCTCGCTTGCT-CACGTTCGCCTGAGTCGCCGACCG----GAGGAAGTCCGGCAGGGAGG 38138
| |||||| | || | | | | || ||| | |||| |||| | | | |
Sbjct 1768 ACGCGCTTGTTGCAGG-----CGGTGGCGTCGATCTTGTCGAGGTAGTCGGAGAAGTCCG 1714
Query 38139 TGAACTTCCCCCAGGCTTCCCGCAGTTGGACGATCTCCTCGACCATGCTCTCGCCCACGT 38198
||||||||||| | || ||| || |||| ||||| | | |||||| ||||
Sbjct 1713 TGAACTTCCCCTTCTCCTCGCGCGCCGCGATGATCGAGTCGACGACGTCCTCGCCGACGT 1654
Query 38199 TCTTCACGGCGGTCAGTCCGAAGCGGATCTCCCGCTCCCCGTTCGGGGTG-AAGGAGGAG 38257
| || ||| || ||||||||||| ||| || ||| ||| || |||| | ||
Sbjct 1653 TGCGGACCGCGCCGAGGCCGAAGCGGATGTCC---TCGCCGA-CGGACTGGAAGGTGTAG 1598
Query 38258 TTCGAGACCGACACGTC-GGGCGGCAGGACCCGAAGGCCCATGCGCCTGCACTCGCCGAG 38316
|| | ||||| |||| | || || || | || | | | | ||| ||| ||||
Sbjct 1597 GCGGACTCGTTGACGTCCGGGCTG-AGCACGCGCACCCCGAGGTGGCGGCAGTCGGCGAG 1539
Query 38317 GTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGCCATGTACTC 38376
||| | || ||||| ||| | ||| ||||||||||||||| ||||||||||||||
Sbjct 1538 GTAGATCGCGGACTTGTCCTTCTTGTCCGCCACCGAGGTGAGCAGCGCCGCCATGTACTC 1479
Query 38377 GGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGA 38436
||| | ||| ||| ||| ||||| || || | | || | || ||||| | || |
Sbjct 1478 GGCGGTGTAATGCTCCTTGAGGTAGGCGGTCCAGAAGCTCACCAGACCGTAGCCGGCGGC 1419
Query 38437 GTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCCGGAT 38496
||||| |||||||| ||||| |||||||| || | | | |||||||| ||| |||
Sbjct 1418 GTGCGACTTGTTGAGCGCGTAGCCGGCGAACGGCAGCACCGTGTCCCACAGGGCCTGGAC 1359
Query 38497 GGCAGCGTCCGAGTAGCCTCGCTCG-CTTGCTCCCTTCTG-GAAGTTCACGAACTCCTTG 38554
||| |||| |||||||| | | | ||| | || | | ||| || |||||||||||
Sbjct 1358 GGCCTCGTCGGAGTAGCC--GTTGGACTTCATGCCGGCGGCGAACTTGTCGAACTCCTTG 1301
Query 38555 GCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGG 38614
|||||||||||||||||||||||||||||||| |||| |||||||| |||| |
Sbjct 1300 GCCAGCACCTCGGGCTTCTTCTTGCCCATGGCCTTGCGGAACCCGTCGGCCTCACCGGCG 1241
Query 38615 GTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCG 38674
||||| || | |||||| | || | |||||||||||| | |||||| |||
Sbjct 1240 GTGTAGTTCGCGACCTTCTGCGAGATCCTCATGATCTGCTCCTGGTACACGATGAGACCG 1181
Query 38675 AAGGTCGGGTCCAGGATCTCGGCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATC 38734
||||| |||||||| || | | ||| | | ||| |||||||||||| ||||
Sbjct 1180 TAGGTCTCCTCCAGGATGTCCTTGATGGACTCGGCGAGCTCCGGGTGGATCGGCTCGATC 1121
Query 38735 TCCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCATGCCCATCGGACCC 38794
|| | |||||||||||| ||||||| | ||||| || | |||||||| |||
Sbjct 1120 GGCTTGCGGCCGTTCTTGCGGTCCGCGTAGTCCCAGTGCGCCCCGACACCCATCGGGCCC 1061
Query 38795 GGACGGTACAGCGCCACG-ACGGCGGAGATGTCCTCGAA-CTGGTCCGGCTTCAGCAGGC 38852
|| ||||||||||||| | ||| | | ||||| | ||| | ||| ||||||| |
Sbjct 1060 GGCCGGTACAGCGCCAGGGACGCCACA-ATGTCGTTGAAGCCGGTG-GGCTTCATGCGCT 1003
Query 38853 GGAGCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAACACCGAGAGCGTGTCGCCCCTGG 38912
|||||| |||| ||||| ||| |||||||| | ||||||||| || | ||
Sbjct 1002 TGAGCAGTTCCTGCATGCCGCCGGAGTCCAGCTGGAAGATGCCGAGCGTGTCACCGCGGG 943
Query 38913 CCAGCAGCTCGTACGTCGCGGGGTCATCCAGCGGGATGTTCTCGATGTCGACGTGCTCAC 38972
||||||| || || | ||| ||||| || || | |||||| | ||||| || ||| |
Sbjct 942 CCAGCAGTTCATAGGACGCCGGGTCGTCGGTCGACAGGTTCTCCAGGTCGAAGTCCTCGC 883
Query 38973 CACGGTTGCGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGA 39032
| ||||| ||||||||| | |||| | |||| |||||||| || ||||| |
Sbjct 882 CCCGGTTCTTCTTGATGTTCTCCAGGCAGTCGGCGATGACGGTGAGGTTGCGCAGCCCCA 823
Query 39033 GGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGT-CGAACTGCGTGATC 39091
|||||||||||||||||||||| | ||||| ||| ||||||| | | | | ||||||
Sbjct 822 GGAAGTCCATCTTCAGCAGGCCGATGGCCTCACAGGCCGGGTAGGGCCAGCCG-GTGATC 764
Query 39092 GTTACGCCGTCCGCAGGCCGCACCCACGTCGGGATGTGATCGACCAGCGGCTCGTCGGAC 39151
||||||| || ||| |||| |||||||||| |||| ||||||| | || |
Sbjct 763 AGGGCGCCGTCGTTGGGGCGCTTCCACATCGGGATGTGGTCGAGCAGCGGCACCGAGGCC 704
Query 39152 ATGATCACACCGGCTGCGTGCACGCCCATCTGCCGGACGAGACCTTCGAGGCCACGCGCG 39211
|||||||| || ||||| |||| ||| ||||| | || || ||||| | |||
Sbjct 703 ATGATCACTGCGCAGGCGTGGCCGCCGGCCTGGCGGACCACGCCCTCCAGGCCGAGGGCG 644
Query 39212 AGGTCAATGACCTCCTTCGCGTCCTTGTCGTTCTCGTACAGCGCCCGGATCTCGCCCGCC 39271
||| || |||||| | || ||| ||||| || | |||||||| | |||
Sbjct 643 TCGTCGTAGATCTCCTTGACCACCGGATCGGTCTCGATGAGGGTGCGGATCTCCGCGGCC 584
Query 39272 TCGTCGTAGCGCGGGTGCTCCGGGTTGGTGATGCCCTCCAGGGGCAT---CGACGCGCCC 39328
|| ||||||||||||||||||| | ||||||| ||| || || | ||| ||
Sbjct 583 GCGCCGTAGCGCGGGTGCTCCGGATCCATGATGCCGGACAGCGGGATGTCCTTCGCCGCC 524
Query 39329 ATCACATCGGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGAAA---GGGCT---TG 39382
| | || | || |||||||| | | ||| ||| ||| || ||||| |
Sbjct 523 TGCGCCGGGGGCAGG---GCCTTGGTGATCCGGTCGGCGATCTGGAAGCCGGGCTGGCCG 467
Query 39383 TCCAGCACGCGGGCCGCGTCCTTCATCGCGTTGCGGGCCTTGATCCTGCCGTACGTCGCG 39442
| | ||||||| |||||||| ||||| | || ||| | | ||||| | || |
Sbjct 466 TGGTGGGCGCGGGCGGCGTCCTTGATCGCCTGCTTGGTCTTCACCGTGCCGAAGGTGATG 407
Query 39443 ATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGG 39502
| ||| ||||||||||| ||| | |||| || | |||| ||||||| ||| |
Sbjct 406 ACCTGGGCGACCTTGTCCTCGCCCCAGTTCTGGGCGGCGTAGCGGATCATCTCGGAA--- 350
Query 39503 CGACGGTCAT---CGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGG 39559
|| ||||||| ||||||||||||| | ||||| |||| ||| || ||||| |||
Sbjct 349 CGCCGGTCATCGGCGAAGTCGATGTCGATATCGGGGGCGGAGGGGCGTTCCGGGTTGAGG 290
Query 39560 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39619
|| |||||||| || |||||||| ||||||||| | || ||||||| || |||||
Sbjct 289 AATCGCTCGAACATCAGCCCGTGCTCGATGGGGTCGATGTTGGTGATCGTCAGTGCGTAG 230
Query 39620 GCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTC 39679
||| |||| | ||| || || |||||||| || |||||||| | | ||| |
Sbjct 229 GCGACCAGGGCGCCGGCGGCGGAGCCACGGCCCGGGCCGACGGAGATGCCGATGGAGCGG 170
Query 39680 GCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATC 39739
|| ||||| ||||||||||||||||||||| |||||| | ||| || || |||
Sbjct 169 GCGTGCTTGATGAGGTCGGCGACGACGAGGAAGTAGGACGGGTAGCCCTTCATGTCGATG 110
Query 39740 ATGTCGATCTCGTAGTCG 39757
| ||||||||| |||
Sbjct 109 ACACTGATCTCGTACTCG 92
>SEQ43235
Length=559
Score = 156 bits (172), Expect = 1e-33
Identities = 181/244 (74%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 40113 AGTCGTTGGTGACCACCGGGGTGAGACCGAGGCGCTGACCGAGGCGGTAGAGGTCGTCGC 40172
||||||||||||||| ||| | ||| ||||||| | |||| | ||||||||| |
Sbjct 6 AGTCGTTGGTGACCAGCGGCGGGAGGGCGAGGCGGCGTCCGATCTCGAGGAGGTCGTCCC 65
Query 40173 GGACGCGCCGCTCGATCTCCAGGCCGTGGTCCATGATCTCCAGGAAGAAGTTGTCCTTCC 40232
|||| ||| |||||| ||||||||||||||||| ||| |||||| ||||||| |
Sbjct 66 GGACCCGCTTCTCGATGGACAGGCCGTGGTCCATGAGCTCGAGGAAGTAGTTGTCGCGGC 125
Query 40233 CGAAGATCTCCCGCCACTTCGCAGCCTCGGCGACGGCCTCCTCGTACTGACCGAGGTTGA 40292
|| |||| ||| |||| ||||| || | ||| ||||| | | |||| ||||| |
Sbjct 126 CGTAGATGTCCTGCCATTTCGCCGCGGCCTCGAGCGCCTCGTTGAACTGGCCGAGCCGCA 185
Query 40293 GCCGGGTCATCACAGCACCACCGGGGCATCCCGTGGTGCCGATCAGGCCCTCTGCGTGCT 40352
|||||||| ||| | || |||||| || |||||| |||| ||| || |||||||
Sbjct 186 GCCGGGTCTGCACCTCGCCGGAGGGGCAGCCGGTGGTGGCGATGCTGCCGTCGGCGTGCT 245
Query 40353 CGGC 40356
||||
Sbjct 246 CGGC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160152269100750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |