Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq3808 122 7e-23 >seq3808 Length=15542 Score = 122 bits (134), Expect = 7e-23 Identities = 224/327 (69%), Gaps = 6/327 (2%) Strand=Plus/Minus Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGG 118433 |||||||||| | ||||||||| |||||| ||| | | || ||| || | || Sbjct 6024 AAAATCTTCATAACGAAAGTCTTCAATATTTGTGACCTGCCGCTTAATGTTAAGCTTAGG 5965 Query 118434 AAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGAC 118493 ||| || |||||| || | ||||| ||| || ||| || | ||||| | ||| || Sbjct 5964 AAATGGACGAGGCTGCCGCTTTAGTTGCTGTTGCAATGGTTCCACATGATTAAGATACAC 5905 Query 118494 ATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAAT 118553 ||||| ||| || || || || | || |||||||| | | || |||| || ||||| Sbjct 5904 ATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGCTTCAATCCGGTCACATGGGCAAT 5845 Query 118554 CATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGC 118613 |||||| || | || || ||| | ||||||||||| || || ||||||||||| Sbjct 5844 CATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAAGGAACCCCGAGCCCCATGTCTGC 5785 Query 118614 TGATCTCTGGTACAATTGGCAAGAGAGCTCCCC----GTTTGC--AACATAAAACTGACT 118667 || |||||||| || || ||||| || || | |||| ||||| ||||| Sbjct 5784 ACTTCGCTGGTACAGATGACAGGAGAGTTCTCCTCGAGATTGCGACACATAGAACTGCAC 5725 Query 118668 TATGATGTGACATGGAGGCAGAACCAT 118694 | | ||| || |||||||| |||| Sbjct 5724 CAAGCAGTGGCAAGGAGGCAGTGCCAT 5698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414243903543220