Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 87.8 1e-12 >SEQ10860 Length=7223 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || ||||| || || || || || || |||| |||||| | Sbjct 1680 ATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 1621 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| |||||| || || ||||||||||| |||| || | Sbjct 1620 GATACCATTGAAAAT--GTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATC 1563 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || || || || |||||||| || |||||||| || | |||| | |||||||||| Sbjct 1562 AACAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTACA 1503 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 | |||||||||||| || ||||| ||||| Sbjct 1502 ATATCCAAAAAGAGTCTACATTGCACTTGGT 1472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355662439249335