Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 165 6e-36 >SEQ10860 Length=7223 Score = 165 bits (182), Expect = 6e-36 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||||||||||||||| || || |||||||| || || || | || Sbjct 1680 ATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 1621 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| || ||| ||||||||||| | || ||||||||| Sbjct 1620 GATACCATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAA 1561 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || ||||||||||| ||| ||||||| | |||||| | ||||||||| Sbjct 1560 CAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTACAAT 1501 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || ||||||||||| ||||| || || || Sbjct 1500 ATCCAAAAAGAGTCTACATTGCACTTGGT 1472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337819670821340