Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq3808 131 1e-25 >seq3808 Length=15542 Score = 131 bits (144), Expect = 1e-25 Identities = 170/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 29651 GGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGT 29710 |||||||| || | ||| || || |||| |||||||| |||||||||||| || || || Sbjct 5927 GGTTCCACATGATTAAGATACACATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGC 5868 Query 29711 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 29770 | | ||||| || || || |||||||| ||||| || | || |||||||||||| Sbjct 5867 TTCAATCCGGTCACATGGGCAATCATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAA 5808 Query 29771 GGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCC---- 29826 || ||||||||||||||||| | | |||||| || || || ||||| ||||| Sbjct 5807 GGAACCCCGAGCCCCATGTCTGCACTTCGCTGGTACAGATGACAGGAGAGTTCTCCTCGA 5748 Query 29827 -GTCGC-TCACGTAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCAT 29874 | || ||| || ||||| ||| ||| ||||| ||||| || ||||| Sbjct 5747 GATTGCGACACATAGAACTG-CACCAAGCAGTGGCAAGGAGGCAGTGCCAT 5698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405934974994030