Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value SEQ22413 156 3e-33 SEQ32968 152 3e-32 SEQ43844 145 5e-30 SEQ37149 93.3 3e-14 >SEQ22413 Length=7522 Score = 156 bits (172), Expect = 3e-33 Identities = 252/360 (70%), Gaps = 8/360 (2%) Strand=Plus/Minus Query 71950 ATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCTTCACCCCCTCGGGCGCG 72009 |||||| | |||| || || || || ||||| |||||| ||||||| || || Sbjct 3681 ATCACCATCGTCGGCAACCTCGTGGCGGACCCCGAGTTGCGCTACACCCCCAGCGGTGCC 3622 Query 72010 CCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAAGCAGTCCAACGAG 72069 ||||| |||||||| || || ||| ||||| ||||||| ||| ||||| || Sbjct 3621 GCGGTCACCAACTTCCGGGTGGCTTCCACACCGCGACGCTTCGACTCACAGACCAACCAG 3562 Query 72070 TGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGCGCGAGCCGGCCGAGAAC 72129 ||| |||| |||||| | |||||| |||||||||||||||| | ||||||||| Sbjct 3561 TGGGTCGACGACGAGGCCTTGTTCCTGACCTGCAACATCTGGCGCACCGCCGCCGAGAAC 3502 Query 72130 GTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTC-CAG---GGTCGCCTCAAGCA 72185 ||| || | ||| ||||||| || || |||||| | | ||| || |||| Sbjct 3501 GTCGCCAACAGCCTGCACAAGGGCGACCGGGTGATCGTCACCGGCCGGTTGCGTCAA--- 3445 Query 72186 GCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAGGTCGAGGA 72245 || ||||||||| || || ||||| || || || ||||| | ||| ||| || Sbjct 3444 -CGGTCCTACGAGACCCGCGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGACCGACGA 3386 Query 72246 GATCGGCCCCGCACTGCGGTACGCCACCGCCCGCGTGGTCCGGACCCCGCGTAACGGCGG 72305 | |||||||| | ||||| ||||||||||||| || | | |||||| || | ||||| Sbjct 3385 GGTCGGCCCCTCGCTGCGCTACGCCACCGCCCAGGTCGCCAAGACCCCCCGACAGGGCGG 3326 >SEQ32968 Length=2597 Score = 152 bits (168), Expect = 3e-32 Identities = 213/296 (72%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 72004 GGCGCGCCGGTCGCCAACTTCACCGTCGCA--AGCACCCCG-CGGTACTTCGACAAGCAG 72060 |||||| ||||||| |||||| |||||| | | ||||| |||| ||||| | || Sbjct 2125 GGCGCGGCGGTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGT---TCGACTCGAAG 2069 Query 72061 TCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGCGCGAGCCG 72120 || ||| ||||| |||| ||||| || ||||| |||||||| |||||||| || | Sbjct 2068 TCGAACCAGTGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCC 2009 Query 72121 GCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGGGTCGCCTC 72180 |||||||||||| | | || ||| |||||| ||||| |||||| || || || Sbjct 2008 GCCGAGAACGTCGCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGCTG 1949 Query 72181 AAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAGGTC 72240 ||||| |||||| || || || ||||| || || || ||||| | |||||| Sbjct 1948 CGCCAGCGGTCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTC 1889 Query 72241 GAGGAGATCGGCCCCGCACTGCGGTACGCCACCGCCCGCGTGGTCCGGACCCCGCG 72296 || ||| ||||||| | || |||||||||||||| | || | | |||||| || Sbjct 1888 GACGAGGTCGGCCCGTCTCTCCGGTACGCCACCGCACAGGTCGCCAAGACCCCCCG 1833 >SEQ43844 Length=619 Score = 145 bits (160), Expect = 5e-30 Identities = 233/335 (70%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 71941 GACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCTTCACCCCC 72000 |||||| |||||| | |||| || || ||||| ||||||||||||| |||||| Sbjct 1 GACACCCCCATCACCATCGTCGGCAACCTCGTAGCCGACCCCGAACTGCGCTACACCCCG 60 Query 72001 TCGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAAGCAG 72060 || ||||| | || |||| | |||||| |||||| || ||| |||||||| Sbjct 61 TCCGGCGCCGCCGTGTGCAACGGCCGTGTCGCATCCACCCCCCGCACGTTCAACAAGCAG 120 Query 72061 TCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGCGCGAGCCG 72120 ||||| ||||| |||| ||||| || || ||||| || |||| | |||||| || | Sbjct 121 ACCAACCAGTGGGAGGATGCCGAAGCACTGTTCCTCACCTTCAACCTGTGGCGCCAGGCA 180 Query 72121 GCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGGGTCGCCTC 72180 || |||||||| | | ||| |||||| || || |||||| || ||| Sbjct 181 GCGGAGAACGTGGCGAACAGCCTGCACAAGGGTGACCGGGTGATCGTCGTCGGCAATCTC 240 Query 72181 AAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAGGTC 72240 ||||| ||||||| ||||| ||||| | || || || |||| |||||| Sbjct 241 CGCCAGCGGTCCTACGAGTCGAAGACCGGCGACACGCGCACCGTGTACGAGATCGAGGCG 300 Query 72241 GAGGAGATCGGCCCCGCACTGCGGTACGCCACCGC 72275 || ||| ||||||| | || |||||||||||||| Sbjct 301 GACGAGGTCGGCCCTTCCCTCCGGTACGCCACCGC 335 >SEQ37149 Length=713 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 43045 GCCATCGAGGAGTTCGACGCGGACCCGGGCGTGGACGTCATCATCCTGGCCCGCGGCGGC 43104 ||| |||| || | || ||||| || | || |||||||||||| | |||||||||||| Sbjct 446 GCCCTCGATCAGCTGGAAGCGGATCCCCGGGTCGACGTCATCATCGTCGCCCGCGGCGGC 505 Query 43105 GGCTCGAAGGAAGACCTCCTCCCGTGGTCCGACGAGGCTCTGGTTCGCGCCGCGTTCG-- 43162 |||||| ||| |||||||| || | ||||| ||| | || || || | ||| || Sbjct 506 GGCTCGGTGGAGGACCTCCTGCCCTTTTCCGAGGAGACACTCGT--CCGGCACGTCCGCA 563 Query 43163 CGTCTGCAACCCCGGTTGTGTCTGCGATTGGCCACGAGAATGATCGGCCGCTCCTCGACC 43222 || | || ||||| || ||| || || || || || ||| |||||||| Sbjct 564 CGATGACGACTCCGGTCGTCAGTGCCATCGGACAAGAACCGGACACCCCGGTCCTCGACA 623 Query 43223 GCGTTGTGGACCTTCGAGCGGCAACTCCGACGGATGCAGCGAAACGTGTCGT 43274 || | || || || || || || || ||||| || ||||| |||||||| Sbjct 624 ATGTCGCCGATCTGCGGGCCGCGACGCCCACGGACGCCGCGAAGCGTGTCGT 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297752597355500