Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq3808 136 3e-27
>seq3808
Length=15542
Score = 136 bits (150), Expect = 3e-27
Identities = 281/414 (68%), Gaps = 8/414 (2%)
Strand=Plus/Minus
Query 27145 GGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGT 27204
|||||||| |||| || || || |||| ||||||| |||||||||||| || || ||
Sbjct 5927 GGTTCCACATGATTAAGATACACATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGC 5868
Query 27205 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 27264
| | ||||| || || || |||||||| ||||| || | || ||||||||||||
Sbjct 5867 TTCAATCCGGTCACATGGGCAATCATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAA 5808
Query 27265 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCC---- 27320
|| ||||||||||||||||| | | |||||| || ||||| ||||| |||||
Sbjct 5807 GGAACCCCGAGCCCCATGTCTGCACTTCGCTGGTACAGATGACAGGAGAGTTCTCCTCGA 5748
Query 27321 -ATCGC-TTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAG 27378
|| || || || ||||| | | |||||| ||||| || ||||| | |
Sbjct 5747 GATTGCGACACATAGAACTGCACCAAGCAGTGGCAAGGAGGCAGTGCCATTTTGGGTATA 5688
Query 27379 TCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGG 27438
|| ||| ||||| || ||| ||||| || | || || ||||| | ||
Sbjct 5687 TCCAAGGGATTCCACGCCGACATAATGATACGACGATCCGAGGGATTGTTTCGAATCGTA 5628
Query 27439 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGT 27497
|| | | | ||||||||||| | || || |||||| | | || || ||
Sbjct 5627 TCAATCACTTGCTGCAGCTGATCGATGCCTTGTCCGCTGTAGTCATCATCGCAGGTGCG- 5569
Query 27498 GTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551
||||| ||||| ||||| | ||| || || ||||| ||||| ||||| || ||
Sbjct 5568 ATACTCGGCTCCAAAATGACGCCACTGAAAGCCGTAGACCGGACCCAGATCCCC 5515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369299572172255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |