Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_030906.1 Length=83324 Score E Sequences producing significant alignments: (Bits) Value SEQ29447 123 1e-23 seq963 91.5 8e-14 >SEQ29447 Length=7397 Score = 123 bits (136), Expect = 1e-23 Identities = 171/236 (72%), Gaps = 10/236 (4%) Strand=Plus/Minus Query 30588 GATGTATGCCAACTACGCAGTTCCCGAATCTCTGAAGTACCCGCACGACGCGGTTGGTAG 30647 |||||| |||| | | || ||||| || || ||||| ||||||||||||||| | || || Sbjct 5606 GATGTACGCCAGCAATGCGGTTCCGGAGTCGCTGAACTACCCGCACGACGCGATCGGGAG 5547 Query 30648 TGACCACGACTCCGTGGGACTGTTCCAGCAGCGACAGGCCGGTTGGGGAACACTCGCTCA 30707 ||||| || ||| | || |||||||||||||| |||||||| ||||| || |||| || Sbjct 5546 CGACCATGATTCCATCGGTCTGTTCCAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACA 5487 Query 30708 GCGCATGAATCCACGTGCCTCGGCTGGTC--TGTTCTTCAACAAGATGAT---GACGTTC 30762 ||| ||| |||| | | | || ||| |||| ||| | |||| | || |||| Sbjct 5486 GCGTATGGATCCGCACGACAGTGC--GTCGATGTTTTTCGCCGCGATGCTGCGGAAGTTC 5429 Query 30763 ---AACTGGCGAGCAATGGACCCTGGTGCCGCGTGCCAGCGAGTCCAGGTGTCCGC 30815 ||||||| | |||||||| || |||| | ||| | || ||||| || || Sbjct 5428 CCGAACTGGCAGTCGATGGACCCCGGCGCCGTGGCGCAGGGTGTGCAGGTCTCGGC 5373 >seq963 Length=26998 Score = 91.5 bits (100), Expect = 8e-14 Identities = 176/253 (70%), Gaps = 14/253 (6%) Strand=Plus/Plus Query 39813 GACTTCGAGGCCAAGGACGGGACGCCGTTTTATGCCATGCAGGCCGGA---ACCGTGCTC 39869 ||||||| ||| ||||| || || || || ||| ||| ||||| || || ||| Sbjct 21951 GACTTCGCCGCCGCCGACGGCACCCCCTTCTACGCC-TGC--GCCGGGGGCACAGTCCTC 22007 Query 39870 TACATCGGCCCCGCAGACGGTTACGGGCAGTGGATCGTGGTCG---ACTCTGACAACGCG 39926 |||||||||||||| ||| ||||| |||||||| || ||| || | |||| | Sbjct 22008 TACATCGGCCCCGCCAGCGGCTACGGTCAGTGGATTGTCCTCGACCACCCGGACAGTG-- 22065 Query 39927 CAGGGTGCCGG-GTGTGTCGAGTACGGGCACATGTGGAACGCGTTTGCCACAGGACTAAA 39985 |||| | ||| ||| ||||||||| || |||||| |||| | || || || || | Sbjct 22066 -AGGGCGGCGGCGTG-ACCGAGTACGGCCATATGTGGGACGCCTACGCGACTGGCCTGCA 22123 Query 39986 GATTGGGTCTCGTGTCCAGGCAGGGCAGTTGCTGGGATACGTCGGTTCCAACGGTGAGTC 40045 | ||| | || | ||||| ||| | | || |||||||| || || ||| || | Sbjct 22124 GCAGGGGCAGTGGGTTGATGCAGGACAGCTCATCGGCTACGTCGGGTCGAATGGTCAGGC 22183 Query 40046 GACCGGCCCTCAC 40058 ||||||||| ||| Sbjct 22184 GACCGGCCCGCAC 22196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 266362245657925