Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_030913.1
Length=58308
Score E
Sequences producing significant alignments: (Bits) Value
seq6253 251 3e-62
seq5449 98.7 4e-16
>seq6253
Length=4700
Score = 251 bits (278), Expect = 3e-62
Identities = 391/555 (70%), Gaps = 18/555 (3%)
Strand=Plus/Minus
Query 43694 CCTGACCCTCACCGACCTGTTCTGCGGCGCCGGCGGATCGTCGACGGGCGCCATCGACAT 43753
||| |||||| ||||| | |||||||| ||||||||||| || || || || ||||| |
Sbjct 4474 CCTCACCCTCTCCGACTTCTTCTGCGGTGCCGGCGGATCCTCCACCGGAGCACTCGACGT 4415
Query 43754 CCCGGGCGTCACCGTCCGGATCGCCTCGAACCACTGGGACCTCGCTGTCGAGACCCACAA 43813
||| |||||| |||||| |||| | | ||||||||| ||||| ||||| |||||| |
Sbjct 4414 CCCCGGCGTCGACGTCCGCGCCGCCGCCACCCACTGGGATCTCGCCGTCGAAACCCACCA 4355
Query 43814 CTCGAATCACCCCGACGCTGACCACCTGTGCGCGGACCTCTCGCAGATCGATCCCCGGTA 43873
| ||||| ||||| || ||| | ||||| ||| || ||| ||| || | |
Sbjct 4354 GCGCCACCACCCGGACGCCGAACACATCTGCGCCGACATCAGCCAGTACGAGCCGAGCTT 4295
Query 43874 CTTCCCGACAACCGACATCCTGTGGGCCTCACCCGAGTGCACCAACCACTCGGTAGCGAA 43933
||||| || ||| || ||| ||| ||| ||||||| |||| |||| ||| |
Sbjct 4294 GTTCCCCCACACGGACCTCGCCTGGTTCTCCCCCTCCTGCACCAGCCACACGGTGGCGCA 4235
Query 43934 GGGC------CG---CAAACGGGTTGGCGCGCAACCAGACCTGTTCGGCGAGATCC---T 43981
|||| || | | |||| | ||| | || | ||| ||| || | || |
Sbjct 4234 GGGCATGGCCCGTGCCGACCGGGCCGCCGC-CTAC--GTCCT---CGGAGAAACCCCCCT 4181
Query 43982 GCCCGACGCTGCATCGGAGCGGTCCCGAGCGACGATGTGGGACGTCCCGCGGTTCGCCGA 44041
||||||| || || || ||||| || || ||||||||||| ||| ||| ||||
Sbjct 4180 CCCCGACGACGCGCACGAACGATCCCGCGCCACCATGTGGGACGTGGTGCGCTTCACCGA 4121
Query 44042 GGTCCACCATTACCGCGCCGTGATCGTCGAGAACGTCGTCGACGCCTGGCATTGGGTTCC 44101
| |||||| ||| ||| || || |||||||||||| ||| | | | |||| ||
Sbjct 4120 GTACCACCACTACGCCGCGGTCATTGTCGAGAACGTCACCGAGGTCACCAAGTGGGCGCC 4061
Query 44102 GTTCCGCGCCTGGCTCATGGCTATGGACTGCCTCGGCTACGACCACCACATCGTCATGCT 44161
|||| ||| ||| ||||||| ||||| ||||||||| | |||| ||| ||||||||
Sbjct 4060 ATTCCCCGCGTGGATCATGGCGATGGAAGCGCTCGGCTACAAGCACCGCATTGTCATGCT 4001
Query 44162 CAACTCGATGCACGCCCAGACGTTCGGCCCCGGGGCGCCGCAGTCCCGCGACCGCATGTA 44221
|||| ||||||||| || |||||||| || |||| ||||||||||| | ||
Sbjct 4000 CAACAGCATGCACGCCGGCCTGTACGGCCCCGCCGCCGCGCAATCCCGCGACCGGTTCTA 3941
Query 44222 CGTCGTGTTCTGGCA 44236
| ||||||||||||
Sbjct 3940 CTGCGTGTTCTGGCA 3926
>seq5449
Length=2013
Score = 98.7 bits (108), Expect = 4e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 53014 ACGCTCGAGGGGACCATGCTCGCGGCCTGGGGCGACTACGTGATCCGCGGTGTCCAGGGC 53073
|| || ||||| ||||| ||| || ||| |||||| | ||||| ||| | |||
Sbjct 570 ACCCTGGAGGGAGACATGCGCGCCACCCCGGGGGACTACATCATCCGGGGTATTAGCGGC 629
Query 53074 GAGTTCTACCCGTGCAAGCCCGACATCTTCGCAGAGACCTACGACGA 53120
|||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 630 GAGTTCTACCCGTGCAAGCCCGACATCTTCGCGGAGACCTACGAGGA 676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 186361911542700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |