Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
SEQ45358 250 1e-61
SEQ32968 205 6e-48
SEQ43844 203 2e-47
SEQ22413 165 5e-36
SEQ37149 143 2e-29
SEQ25496 86.0 4e-12
>SEQ45358
Length=678
Score = 250 bits (276), Expect = 1e-61
Identities = 291/393 (74%), Gaps = 0/393 (0%)
Strand=Plus/Minus
Query 78221 GCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCACC 78280
|| ||||||||||||| || | |||||| ||| || ||||| || || |||
Sbjct 396 GCGATCAACTGGAACACCATCCCGGACGAGAAGGACCTGGAGGTCTGGGACCGGCTGACC 337
Query 78281 GGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACC 78340
|| ||||||||| ||||||||||||| ||| |||||||||||||| ||||| |||
Sbjct 336 GGAAACTTCTGGCTGCCCGAGAAGGTGCCGCTGTCCAACGACATCAAGAGCTGGGGCACG 277
Query 78341 CTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGAC 78400
|| || || |||||| ||| ||||| || |||||||| || ||| |||| |||
Sbjct 276 CTCACCGAGGCGGAGAAGACCACCACCATGCGGGTCTTCACCGGTCTGACCATGCTGGAC 217
Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460
|||||||||||||| || || || | | ||||||| || || ||| || ||||||
Sbjct 216 ACCATCCAGGGCACCGTCGGTGCGACCAGCCTCATCGAGGATTCCGTCACGCCCCACGAG 157
Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520
||||||||| ||||||||||||| ||||||||||| || ||||| | ||||||| |||
Sbjct 156 GAGGCGGTGTTCACCAACATCGCCTTCATGGAGTCCGTGCACGCGACGTCCTACTCGTCG 97
Query 78521 ATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAG 78580
|||||| |||| |||| || || | | ||| || ||||| ||||||||| |
Sbjct 96 ATCTTCATGCCGCTCGCCTCCGCCCCGCCGCTCCACGCCGCCTTCCGCTGGTCGGAGTCG 37
Query 78581 AACGAGTACCTGCAGCGCAAGGCCCAGATCGTC 78613
| || ||||||| |||||||| | || |||
Sbjct 36 TCCCAGACCCTGCAGAGCAAGGCCGATATAGTC 4
>SEQ32968
Length=2597
Score = 205 bits (226), Expect = 6e-48
Identities = 249/339 (73%), Gaps = 3/339 (1%)
Strand=Plus/Minus
Query 69642 ATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGGTTCACGCCCTCCGGTGCC 69701
||||| ||| |||| ||||| || ||| || || ||| ||||||| || ||
Sbjct 2179 ATCACTGTCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCCAGTGGCGCG 2120
Query 69702 GCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTCGACAAGCAGTCGAACGAG 69761
||||||||||||||| ||||||||| || || || |||||| | |||||||| ||
Sbjct 2119 GCGGTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGTTCGACTCGAAGTCGAACCAG 2060
Query 69762 TGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGGCGCGAGTACGCCGAGAAC 69821
||| || | |||||||| ||||| ||||||||||||||||| || ||||||||||
Sbjct 2059 TGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCCGCCGAGAAC 2000
Query 69822 GTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAGGGCAAGCTCAAGCAGCGG 69881
|| | | || || || ||||| | |||||| |||||| ||| ||| ||||||
Sbjct 1999 GTCGCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGCTGCGCCAGCGG 1940
Query 69882 TCCTACGAGA---AGGATGGCCAGCCGCGCACCACCTTCGAGCTCGAGGTTGAGGAGATC 69938
|||||||| | || || || ||||||| |||||| | ||||| || ||| ||
Sbjct 1939 TCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTCGACGAGGTC 1880
Query 69939 GGCCCCGCACTCCGGTACGCCACCGCCCGGGTCACCAAG 69977
||||| | ||||||||||||||||| | |||| |||||
Sbjct 1879 GGCCCGTCTCTCCGGTACGCCACCGCACAGGTCGCCAAG 1841
>SEQ43844
Length=619
Score = 203 bits (224), Expect = 2e-47
Identities = 254/348 (73%), Gaps = 3/348 (1%)
Strand=Plus/Plus
Query 69633 GACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGGTTCACGCCC 69692
|||||| ||||||| || |||| ||||| |||||||||||||| || | ||| ||
Sbjct 1 GACACCCCCATCACCATCGTCGGCAACCTCGTAGCCGACCCCGAACTGCGCTACACCCCG 60
Query 69693 TCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTCGACAAGCAG 69752
||||| ||||| || ||| | ||||| || ||||| || ||| ||||||||
Sbjct 61 TCCGGCGCCGCCGTGTGCAACGGCCGTGTCGCATCCACCCCCCGCACGTTCAACAAGCAG 120
Query 69753 TCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGGCGCGAGTAC 69812
| ||| ||||| |||||||||| ||||| ||||| || |||| | |||||| ||
Sbjct 121 ACCAACCAGTGGGAGGATGCCGAAGCACTGTTCCTCACCTTCAACCTGTGGCGCCAGGCA 180
Query 69813 GCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAGGGCAAGCTC 69872
|| ||||||||| | | || || ||||| | ||| || |||||| ||||| |||
Sbjct 181 GCGGAGAACGTGGCGAACAGCCTGCACAAGGGTGACCGGGTGATCGTCGTCGGCAATCTC 240
Query 69873 AAGCAGCGGTCCTACGA---GAAGGATGGCCAGCCGCGCACCACCTTCGAGCTCGAGGTT 69929
|||||||||||||| |||| ||| | |||||||| | |||| ||||||
Sbjct 241 CGCCAGCGGTCCTACGAGTCGAAGACCGGCGACACGCGCACCGTGTACGAGATCGAGGCG 300
Query 69930 GAGGAGATCGGCCCCGCACTCCGGTACGCCACCGCCCGGGTCACCAAG 69977
|| ||| ||||||| | ||||||||||||||||| | | ||||||||
Sbjct 301 GACGAGGTCGGCCCTTCCCTCCGGTACGCCACCGCGCAGATCACCAAG 348
>SEQ22413
Length=7522
Score = 165 bits (182), Expect = 5e-36
Identities = 255/361 (71%), Gaps = 6/361 (2%)
Strand=Plus/Minus
Query 69623 AATGGCA-AATGACA--CCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACT 69679
||||||| || |||| || ||||||| || |||| ||||| || |||||||| |
Sbjct 3703 AATGGCACAAGGACAGACCCCCATCACCATCGTCGGCAACCTCGTGGCGGACCCCGAGTT 3644
Query 69680 CCGGTTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTA 69739
|| | ||| ||| ||||||||||||| | |||||| || || || || |||||
Sbjct 3643 GCGCTACACCCCCAGCGGTGCCGCGGTCACCAACTTCCGGGTGGCTTCCACACCGCGACG 3584
Query 69740 CTTCGACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGT 69799
||||||| ||| | ||| ||||| || | |||||| | |||||| ||||||| |
Sbjct 3583 CTTCGACTCACAGACCAACCAGTGGGTCGACGACGAGGCCTTGTTCCTGACCTGCAACAT 3524
Query 69800 CTGGCGCGAGTACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGT 69859
||||||| |||||||||||| | | || || ||||||| ||| || |||||
Sbjct 3523 CTGGCGCACCGCCGCCGAGAACGTCGCCAACAGCCTGCACAAGGGCGACCGGGTGATCGT 3464
Query 69860 CCAGGGCAAGCTCAAGCAGCGGTCCTACGAGA---AGGATGGCCAGCCGCGCACCACCTT 69916
| ||| | | || ||||||||||||| || || || ||||||| ||
Sbjct 3463 CACCGGCCGGTTGCGTCAACGGTCCTACGAGACCCGCGAGGGTGAGAAGCGCACCGTGTT 3404
Query 69917 CGAGCTCGAGGTTGAGGAGATCGGCCCCGCACTCCGGTACGCCACCGCCCGGGTCACCAA 69976
|||| | ||| || ||| |||||||| | || || ||||||||||||| |||| ||||
Sbjct 3403 CGAGGTGGAGACCGACGAGGTCGGCCCCTCGCTGCGCTACGCCACCGCCCAGGTCGCCAA 3344
Query 69977 G 69977
|
Sbjct 3343 G 3343
>SEQ37149
Length=713
Score = 143 bits (158), Expect = 2e-29
Identities = 266/378 (70%), Gaps = 18/378 (5%)
Strand=Plus/Plus
Query 42100 CATCGGCCTGATCACCG--CGGAGGGCAGCGACGCCGAGAAGGACGTCCTGAACGTCGCC 42157
|||||| |||||||||| || || | || ||||||| |||||||| ||||||
Sbjct 307 CATCGGGCTGATCACCGGTCGCGGGTCCGC--CGCCGAGCGCGACGTCCTCTCGGTCGCC 364
Query 42158 CGGGACCGATGGCCGCACGTGCAGTTCAAGC-CGTACCACATCCCTGTGCAGGGC--CAA 42214
|||||||| ||||| || ||||| || ||| | ||| | |||| |||||| | |
Sbjct 365 CGGGACCGGTGGCCCGCGGTCGAGTTCGAGGTCGT-CAACACCGCTGTCCAGGGCGCCCA 423
Query 42215 CGCTGCGCAGGACGTGCCACCGCCGCCCTGAAGGCACTGGATGCCGACCCCGAGGTTGAC 42274
|| | | | | || || ||||||||| | ||||| || || ||| ||| |||
Sbjct 424 GGCGGTCCCGCAGGT--CATCGCCGCCCTCGATCAGCTGGAAGCGGATCCCCGGGTCGAC 481
Query 42275 GTCATCATCTTCGCCCGCGGCGGCGGGTCCAACCAGGACCTCCTTCCCTGGTCCGACGAG 42334
||||||||| |||||||||||||||| || |||||||||| |||| ||||| |||
Sbjct 482 GTCATCATCGTCGCCCGCGGCGGCGGCTCGGTGGAGGACCTCCTGCCCTTTTCCGAGGAG 541
Query 42335 GGCCTCTCCCGGGCCGTGTTCGC-CGCTAAC-ACGCCCACGGTCAGCGCCATCGGACACG 42392
||| |||| | || ||| || | || || || ||||| |||||||||||
Sbjct 542 ACACTCGTCCGG--CACGTCCGCACGATGACGACTCCGGTCGTCAGTGCCATCGGACA-- 597
Query 42393 AGAAC--GACAAGCCGATGCTGGACCGGGTTGTGGACCTGCGAGCTGCGACTCCGACAGA 42450
||||| |||| ||| | || ||| || | || ||||| || ||||| || || ||
Sbjct 598 AGAACCGGACACCCCGGTCCTCGACAATGTCGCCGATCTGCGGGCCGCGACGCCCACGGA 657
Query 42451 TGCGGCAAAACGTGTCGT 42468
|| || || ||||||||
Sbjct 658 CGCCGCGAAGCGTGTCGT 675
>SEQ25496
Length=2929
Score = 86.0 bits (94), Expect = 4e-12
Identities = 60/67 (90%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 4263 GGGCGTAGCTCAATTGGAAGAGCAGCGGTCTCCAAAACCGCCGG-TGTAGGTTCGAGTCC 4321
|||||| |||||||||| ||||||||||||||||||||||| || || |||||| |||||
Sbjct 400 GGGCGTGGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCC 459
Query 4322 TGCCGCC 4328
|| ||||
Sbjct 460 TGTCGCC 466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299153409789890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |