Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_030927.1
Length=45858
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32968 147 6e-31
SEQ43844 127 6e-25
>SEQ32968
Length=2597
Score = 147 bits (162), Expect = 6e-31
Identities = 228/326 (70%), Gaps = 0/326 (0%)
Strand=Plus/Minus
Query 36189 ATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCGGTTCACTCCGTCCGGCGCG 36248
||||| || |||||||||| || || || || ||| ||| || ||||||
Sbjct 2179 ATCACTGTCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCCAGTGGCGCG 2120
Query 36249 GCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTTCGACCGGGACGCGAACGAG 36308
||||||||||||||| ||||| || || || || | ||||||| | | ||||| ||
Sbjct 2119 GCGGTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGTTCGACTCGAAGTCGAACCAG 2060
Query 36309 TGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACCTGTGGCGTGACGCGGCGGAGAAC 36368
||| ||||| || | |||||| | |||||||| | ||||| | || || ||||||
Sbjct 2059 TGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCCGCCGAGAAC 2000
Query 36369 GTCACGGACTCGCTGTCGAAGGGGACTCGGGTCATCGTGCAGGGCCGGCTGAAACAGCGG 36428
||| || |||| ||| |||||| || || ||||| ||||||||| ||||||
Sbjct 1999 GTCGCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGCTGCGCCAGCGG 1940
Query 36429 AGCTACGAGGACAAAGAGGGCGTCACGCGGACCATCGTCGAGCTGGAAGTGGACGAGATC 36488
|||||| | ||||| | | ||| ||| | ||||| |||| || |||||| ||
Sbjct 1939 TCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTCGACGAGGTC 1880
Query 36489 GGTCCGTCCCTGAAGTACGCGACGGC 36514
|| ||||| || |||||| || ||
Sbjct 1879 GGCCCGTCTCTCCGGTACGCCACCGC 1854
>SEQ43844
Length=619
Score = 127 bits (140), Expect = 6e-25
Identities = 234/338 (69%), Gaps = 4/338 (1%)
Strand=Plus/Plus
Query 36180 GAAACCATCATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCGGTTCACTCCG 36239
|| ||| |||||| | |||||||||| |||||| || |||||||| | ||| |||
Sbjct 1 GACACCCCCATCACCATCGTCGGCAACCTCGTAGCCGACCCCGAACTGCGCTACACCCCG 60
Query 36240 TCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTTCGACCGGGAC 36299
|||||||| || || ||| | ||||| || || || || |||| || | |
Sbjct 61 TCCGGCGCCGCCGTGTGCAACGGCCGTGTCGCATCCACCCCCCGCACGTTCAACAAGCAG 120
Query 36300 GCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACCTGTGGCGTGACGCG 36359
| ||| ||||| |||| | ||| | |||||| | || |||||||||||| | ||
Sbjct 121 ACCAACCAGTGGGAGGATGCCGAAGCACTGTTCCTCACCTTCAACCTGTGGCGCCAGGCA 180
Query 36360 GCGGAGAACGTCACGGACTCGCTGTCGAAGGG-GACTCGGGTCATCGTGCAGGGCCGGCT 36418
||||||||||| || || ||| ||||| ||| ||||| ||||| ||| ||
Sbjct 181 GCGGAGAACGTGGCGAACAGCCTGCACAAGGGTGAC-CGGGTGATCGTCGTCGGCAATCT 239
Query 36419 GAAACAGCGGAGCTACGAGGACAAAGA-GGGCGTCACGCGGACCATCGTCGAGCTGGAAG 36477
|||||| |||||| | | |||| |||| |||||| ||| | |||| | || |
Sbjct 240 CCGCCAGCGGTCCTACGA-GTCGAAGACCGGCGACACGCGCACCGTGTACGAGATCGAGG 298
Query 36478 TGGACGAGATCGGTCCGTCCCTGAAGTACGCGACGGCG 36515
||||||| |||| || ||||| |||||| || |||
Sbjct 299 CGGACGAGGTCGGCCCTTCCCTCCGGTACGCCACCGCG 336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146543723818200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |