Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_030927.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value SEQ32968 147 6e-31 SEQ43844 127 6e-25 >SEQ32968 Length=2597 Score = 147 bits (162), Expect = 6e-31 Identities = 228/326 (70%), Gaps = 0/326 (0%) Strand=Plus/Minus Query 36189 ATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCGGTTCACTCCGTCCGGCGCG 36248 ||||| || |||||||||| || || || || ||| ||| || |||||| Sbjct 2179 ATCACTGTCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCCAGTGGCGCG 2120 Query 36249 GCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTTCGACCGGGACGCGAACGAG 36308 ||||||||||||||| ||||| || || || || | ||||||| | | ||||| || Sbjct 2119 GCGGTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGTTCGACTCGAAGTCGAACCAG 2060 Query 36309 TGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACCTGTGGCGTGACGCGGCGGAGAAC 36368 ||| ||||| || | |||||| | |||||||| | ||||| | || || |||||| Sbjct 2059 TGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGGCCGCCGAGAAC 2000 Query 36369 GTCACGGACTCGCTGTCGAAGGGGACTCGGGTCATCGTGCAGGGCCGGCTGAAACAGCGG 36428 ||| || |||| ||| |||||| || || ||||| ||||||||| |||||| Sbjct 1999 GTCGCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGCTGCGCCAGCGG 1940 Query 36429 AGCTACGAGGACAAAGAGGGCGTCACGCGGACCATCGTCGAGCTGGAAGTGGACGAGATC 36488 |||||| | ||||| | | ||| ||| | ||||| |||| || |||||| || Sbjct 1939 TCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGGTCGACGAGGTC 1880 Query 36489 GGTCCGTCCCTGAAGTACGCGACGGC 36514 || ||||| || |||||| || || Sbjct 1879 GGCCCGTCTCTCCGGTACGCCACCGC 1854 >SEQ43844 Length=619 Score = 127 bits (140), Expect = 6e-25 Identities = 234/338 (69%), Gaps = 4/338 (1%) Strand=Plus/Plus Query 36180 GAAACCATCATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCGGTTCACTCCG 36239 || ||| |||||| | |||||||||| |||||| || |||||||| | ||| ||| Sbjct 1 GACACCCCCATCACCATCGTCGGCAACCTCGTAGCCGACCCCGAACTGCGCTACACCCCG 60 Query 36240 TCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTTCGACCGGGAC 36299 |||||||| || || ||| | ||||| || || || || |||| || | | Sbjct 61 TCCGGCGCCGCCGTGTGCAACGGCCGTGTCGCATCCACCCCCCGCACGTTCAACAAGCAG 120 Query 36300 GCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACCTGTGGCGTGACGCG 36359 | ||| ||||| |||| | ||| | |||||| | || |||||||||||| | || Sbjct 121 ACCAACCAGTGGGAGGATGCCGAAGCACTGTTCCTCACCTTCAACCTGTGGCGCCAGGCA 180 Query 36360 GCGGAGAACGTCACGGACTCGCTGTCGAAGGG-GACTCGGGTCATCGTGCAGGGCCGGCT 36418 ||||||||||| || || ||| ||||| ||| ||||| ||||| ||| || Sbjct 181 GCGGAGAACGTGGCGAACAGCCTGCACAAGGGTGAC-CGGGTGATCGTCGTCGGCAATCT 239 Query 36419 GAAACAGCGGAGCTACGAGGACAAAGA-GGGCGTCACGCGGACCATCGTCGAGCTGGAAG 36477 |||||| |||||| | | |||| |||| |||||| ||| | |||| | || | Sbjct 240 CCGCCAGCGGTCCTACGA-GTCGAAGACCGGCGACACGCGCACCGTGTACGAGATCGAGG 298 Query 36478 TGGACGAGATCGGTCCGTCCCTGAAGTACGCGACGGCG 36515 ||||||| |||| || ||||| |||||| || ||| Sbjct 299 CGGACGAGGTCGGCCCTTCCCTCCGGTACGCCACCGCG 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146543723818200