Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value SEQ45982 176 1e-39 >SEQ45982 Length=694 Score = 176 bits (194), Expect = 1e-39 Identities = 400/596 (67%), Gaps = 22/596 (4%) Strand=Plus/Plus Query 24468 TCATGCTGATGGTGGTGGCGAGCATCTGCCTGCGTGGAAACGCCTTCGTCGAGAAGAAGA 24527 ||| | |||||| |||||| |||||||| |||| ||| |||||||| | ||||| || | Sbjct 76 TCAGGTTGATGGAGGTGGCCAGCATCTGTTTGCGGGGAGACGCCTTCATTGAGAAAAAAA 135 Query 24528 TGATCGGCACTCGCGTTGTTGCGCTTGTCCCGTTGCTGCCTCAGTACATGCGGGTGAAGC 24587 |||| |||| | || |||||| ||| || ||||||| ||||| ||| || | Sbjct 136 TGATTGGCAGAAAGCTGGTGGCGCTTAATCCGCTGTTGCCTCAAAACATGGTGGTTAAAC 195 Query 24588 GCGAAGACAGCGGTCGCCTGAAGTACACCTACACCGAGAACGGTGTGGAGCGCGTCATTC 24647 | || | ||| | || ||||||||||||||||| |||| ||||||| || | Sbjct 196 GTCTGGATACCGGGCAGATGCAGTACACCTACACCGAGGACGGCAAAAAGCGCGTGATAC 255 Query 24648 CAGAGAAGAAC--CTGATGCACATCCGTGGCTTCGGCCTGGATGGCGTCTGCGGCATGCT 24705 | | ||| | |||||||||| || ||||| || |||||||| | |||||||||| | Sbjct 256 C--GGTAGACCGGATGATGCACATTCGCGGCTTTGGTCTGGATGGTGGCTGCGGCATGAT 313 Query 24706 CCCGGTGACCATGGGCCGCGAAATCTTCGGTTCGGCGATGTCTGCCGAGGAGGCCGCCGC 24765 ||| ||| ||||| || | || || |||||||| | | || ||| | || || Sbjct 314 GCCGCTGAGTTCTGGCCGTGACGTGTTTGGGGCGGCGATGGCCGTTGATGAGTCGGCAGC 373 Query 24766 CAAGGTGTTCGCCCAGGGCATGCAGGCTTCCGGGATTC-TCAGCGGTGATACGACTCTCA 24824 || | || | | || |||| | | | |||| | |||| | ||| | Sbjct 374 AAAAATCTTTGAAAACGGTCTGCAAACGT-CAGGATACATCAG------TTCGAAAGTTG 426 Query 24825 CCCCGA------AGCAGCGAGAAGATCTTCGGGCCA--GCCTGACCGCCTTCATGGGATC 24876 | | || |||||||||| || | |||| | | |||| ||| || || Sbjct 427 CGCTGAATAAAGAGCAGCGAGAGCGCCT--GCGCCAATACATAGCCGCGTTCGCCGGTTC 484 Query 24877 GCAGAACGCCGGAAAGATCATGGTTGCCGAGGCCGGCCTGAAGTACCAGGGGATCACGAT 24936 | |||||||| || || ||||| |||| | | | ||||||| ||||||| Sbjct 485 AAAAAACGCCGGTAAAATGATGGTGTTGGAGGGGGATATAACGTACCAGAATGTCACGAT 544 Query 24937 GAACCCCGAAGCTGCGCAGATGCTGGAGTCGCGGTCGTTCAACGTCGAGGAGATGTGTCG 24996 ||| || |||| ||||||||||||||| || | || | | | ||||| || || || Sbjct 545 GAATCCTGAAGACGCGCAGATGCTGGAGAGCCGAGCCTTTAGCATTGAGGAAATCTGCCG 604 Query 24997 TTGGTTCCGCGTCCCGCCGTTCATGGTGGGGCACATGGACAAGCAGTCCAGCTGGG 25052 |||||||| || || || ||| |||||||||| || |||||| ||||||| Sbjct 605 CTGGTTCCGGGTACCACCTTTCTTGGTGGGGCAGGTGACGAAGCAGAGTAGCTGGG 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133792309002330