Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_030941.1 Length=46600 Score E Sequences producing significant alignments: (Bits) Value SEQ29447 113 1e-20 >SEQ29447 Length=7397 Score = 113 bits (124), Expect = 1e-20 Identities = 196/280 (70%), Gaps = 14/280 (5%) Strand=Plus/Minus Query 14202 CTCGTTGAGTCGGGT------ATCAAGATGTTTGCCAACGCTTCTGTGCCTGAGTCGCTC 14255 || || ||||||||| || ||||||| |||| | | | || || |||||||| Sbjct 5632 CTGGTGGAGTCGGGTGACCCGATGAAGATGTACGCCAGCAATGCGGTTCCGGAGTCGCTG 5573 Query 14256 AAGTTCCCGCATGACGCGGTTGGTTCAGACCACGATTCGGTCGGTTTGTATCAGCAGCGT 14315 || | |||||| |||||| | || ||||| ||||| ||||| ||| ||||||||| Sbjct 5572 AACTACCCGCACGACGCGATCGGGAGCGACCATGATTCCATCGGTCTGTTCCAGCAGCGT 5513 Query 14316 CAGGCAGGATGGGGCACTCT-GCAGGAGCGTATG--TCTGC-CTTCGGTTCCACCAAGCT 14371 ||||| || |||||||| | ||| |||||||| || || | | || | | | | Sbjct 5512 CAGGCCGGGTGGGGCACCGTCGCA-CAGCGTATGGATCCGCACGACAGTGCGTC---GAT 5457 Query 14372 GTTCTTGAACGCGATGGTCAAGAAGTTCCCGAACTGGGCGACTATGCCGAAGGGTGATGT 14431 ||| || ||||||| | |||||||||||||||| | | ||| || | || Sbjct 5456 GTTTTTCGCCGCGATGCTGCGGAAGTTCCCGAACTGGCAGTCGATGGACCCCGGCGCCGT 5397 Query 14432 CGCTCAAGGTGTCCAGGTCTCGGCTTATCCCGACCGCTAC 14471 || || ||||| ||||||||||| | ||| ||||| ||| Sbjct 5396 GGCGCAGGGTGTGCAGGTCTCGGCATTTCCGGACCGGTAC 5357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148916823841620