Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value SEQ45334 199 6e-46 >SEQ45334 Length=507 Score = 199 bits (220), Expect = 6e-46 Identities = 267/365 (73%), Gaps = 6/365 (2%) Strand=Plus/Plus Query 88306 GCAGATGAAGACTTAGGCTTCCTGCCGGGCGATGTTGGTGAAAAGTTCGCGCCTTACTTC 88365 || ||||||||| | || ||| ||||||| ||| | || |||||||| ||||| ||| Sbjct 99 GCGGATGAAGACCTCGGTTTCTTGCCGGGGGATATCTCCGAGAAGTTCGCCCCTTATTTC 158 Query 88366 CGACCTGTTTACGATGTGCTCTTAAAACGTCTGGGCAGC--CGTTTCTTACAATACTGCC 88423 || || || || || | || || ||| | || | | | ||| | || ||||||| Sbjct 159 CGCCCGGTGTATGACATTCTGGTACGTCGTTTAGG-ATCTTCCTTTATG-CAGTACTGCC 216 Query 88424 TGAAACCGGGTATAGACAAGGTTGAGATAGCTCCCTTCGCCTATATGCGTGGCCGCAACT 88483 || |||| || | |||||| ||||| || || ||||| |||||||| || |||| || Sbjct 217 TGCGCCCGGAAATCGGCAAGGTAGAGATTGCGCCGTTCGCTTATATGCGCGGACGCACCT 276 Query 88484 TCGAGAACGCGGTCGTTATCTTAGATGAAGCTCAGAACACCACTGCTCAG-CAGATGAAG 88542 |||| || |||||||||||| | |||||||| |||||| || || ||| |||||||| Sbjct 277 TCGAAAATGCGGTCGTTATCCTGGATGAAGCCCAGAACGTGACCGC-CAGCCAGATGAAA 335 Query 88543 CTCTTCCTGACCCGTATCGGGGAGAACTGTATCGTTATCGTTAACGGTGACGTCACTCAG 88602 | ||||||||||| | ||||| ||| | |||||||||||||| ||||| || ||| Sbjct 336 ATGTTCCTGACCCGCCTGGGGGAAAACGTGACGGTTATCGTTAACGGCGACGTGACCCAG 395 Query 88603 TGCGACTTACCTTCCGGGGTGAAGTCGGGACTGGCCGACGCATTAGCCCGTTTCGAAGAA 88662 |||||| | || ||| ||||| || || || ||| || | | || |||||||| Sbjct 396 TGCGACCTGCCGCGCGGCGTGAAATCCGGGCTCAGCGATGCCCTGGAGCGCTTCGAAGAG 455 Query 88663 GACGA 88667 ||||| Sbjct 456 GACGA 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716051092841000